Cannabis sativa (hemp): 115719538
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Entry
115719538 CDS
T08987
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH7, chloroplastic isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csav03012
]
115719538
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115719538
Translation factors [BR:
csav03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
115719538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
UBA_DHX29
DEAD
HA2_C
Helicase_C
DSRM_DHX29
HA2_N
nSTAND3
dsrm
DND1_DSRM
AAA_22
NPHP3_N
ATPase
SRP54
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
115719538
NCBI-ProteinID:
XP_030504480
LinkDB
All DBs
Position
2:91626171..91639835
Genome browser
AA seq
1456 aa
AA seq
DB search
MAPKKKQQQKQKSTAKTQSSSSSATASGGPKLHISAENENRLRRLLLNSGRTAQSAAAPV
DDSLSKTQKAKKLKTIYEKLSCEGFTNDQIELALSALKEGATFEASLDWLCLNLPSNELP
LKFSSGTFQHIDGGGSVRVLLAAQDNWAPSVEASSNIFEDEVGISVKTKGHGKDETLDSC
QPSQADWIKRYVEQQEEDDSKTWEDDLLGTEKISEPRSYDVIAKEYRDARLEAMRAKEKG
DKKSKEQAGNIIRKLKQELSALGLSVDILDSEFENEQASYAASEATNVSSVPHNQSEGET
PGDVECASAFVSHVDESIVDGRVMELCGSEEVSVKATTSDEPIKDKDSAEEESPDVELGD
FFSEDGPQNESLSLEVQKLQQKEKMREMLSDKNLEKLAGIWKKGDPQKIPKAFLHQLCQR
SGWEAPNFNKVHGKGNSFSYTVSVLRKASGRGKSRKAGGLVTLQLPGEGDTFDSVENAQN
AVATFALYRLFPDLPIHLVLTEPYASLIIQWKEGDSSVNVEDTEEDRRASFVDSLLNADG
SRSIVTTDSSINIPQEKSQQSPTEESESSAATVVDSAVERVNHQKEVESAYLRKEQENKM
KMRKYRDMLKTRASLPIAQLKGDILQLLKDNNVLVVCGETGSGKTTQVPQFILDDMINSE
RGGHCNIICTQPRRIAAISVAERVADERCESSPGSNDSLVGYQVRLDSARNEKTKLLFCT
TGILLRKIAGDKNLTGITHVIVDEVHERSLLGDFLLIVLKNLIQKQSAQKSPKLKVILMS
ATVDSDLFSRYFDHCPVITAQGRTHPVTTYFLEDIYESINYRLASDSPASVRYGASGKEK
SGPVNNRRGMKNLVMQAWGDDTILSEERVNPYYVPESYHSYSEQTQQNLKRLNEDFIDYD
LLEDLVCHIDETCSEGAILVFLPGVFEINMLVDMLAASYRFGGPSSDWILPLHSSVASAD
QKRVFLRPPENIRKVIVATNIAETSLTIDDVVYVIDCGKHKENRYNPQKKLSSMVEDWIS
QANARQRRGRAGRVKPGICFCLYTRHRFEKLMRPFQVPEMLRTPLVELCLQIKLLSLGFI
KPFLSEALEPPKDDAMKSAISLLYEVGALEGDELLTPLGHHLAKLPVDVLIGKMMIYGGI
FGCLSPVLSISAFLSHKSPFVYPKDERQNVERAKLALLTDKRDGPTDSYDVDKNSDHLLM
MVAYMKWEKILREKGVKAAHHFCSSYFLSSSVLYMIRDMRIQFGTLLADIGLISFPKNFQ
VGRKRENIDIWLSDPSQPFNMYSHHSSIVKAVLCAGLYPNVAATEKGIAGAALGSLKQSI
GLTSNIIWYDGRREVHIHPSSINSNWKEFRYPFLAFLEKVETNKVFLRDTTIISPYSILL
FGGSINVQHQTGLVIIDGWLKLAAPAQIAVLFKELRLTLHSILKDLIRKPENVNVGSDKV
ISSIIHLLLEEDKPPA
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaaaagaaacaacagcagaagcagaaaagcacggccaaaacgcaatcttcg
tcgtcgtcggcgacggcttccggaggtcccaagcttcacatttcggctgagaatgagaat
cggctccggagacttcttctgaattcgggtcggacggcgcagtctgctgcggctccggtg
gacgattccctctccaagactcagaaggctaagaagcttaaaaccatttacgagaagctt
tcttgcgaaggcttcactaatgatcaaattgagcttgctctctctgctctcaaggagggt
gctacgtttgaggcttctcttgattggttgtgcttgaatttgcctagtaatgagcttcca
ttgaagttttcaagcgggacatttcagcacattgatggaggtggttctgttcgcgtctta
ttggctgctcaggataattgggctccttctgtggaagcatcatcaaatatatttgaggat
gaagtgggcatttctgttaaaacaaagggacatggtaaagatgagactttggactcatgc
caaccttctcaggcagattggatcaaacgctacgtggaacaacaagaagaggatgactct
aaaacatgggaagatgatttacttggtactgagaagatctctgaaccaaggtcctatgat
gtgattgctaaagaatatcgtgatgcacggttggaagctatgagagccaaagaaaaaggt
gacaagaaaagtaaggaacaggcaggaaatatcatccgcaaactgaagcaagagttatct
gcattaggtttatctgttgacattttggattcagagtttgagaacgaacaagcttcttat
gcagcttctgaggcaacaaatgtgagttctgttccccacaaccagtctgaaggagaaact
cctggtgatgtagaatgtgcttctgcatttgtttcgcatgttgacgaatcaattgttgat
ggaagggtcatggagttgtgtggttccgaagaggtttctgtgaaagctactacatcagat
gaacctattaaggataaagactctgcagaagaagagtccccagatgtagagctcggtgat
ttcttttcagaagatggtccccaaaatgaaagtctctctcttgaagttcaaaaactgcag
cagaaagaaaaaatgagagaaatgcttagtgacaaaaatttggagaaattagctggtatt
tggaaaaagggagatcctcaaaagattcctaaggcctttcttcatcagttatgtcaaaga
tcagggtgggaagcccctaacttcaataaagtgcatggaaaaggaaatagtttctcgtat
actgtgagtgttttgcgtaaagccagcgggaggggtaagagtagaaaagctgggggactt
gtcacccttcagcttcccggtgagggtgacacttttgactctgttgagaatgcacaaaac
gcagtggcaacttttgctctttatcggctgtttccagatctcccaatacaccttgtgtta
acagagccttatgcttcattaattatccagtggaaagaaggagattcatcagtcaacgtt
gaagacaccgaggaagatcgacgtgcaagctttgtagattcactattgaatgctgatggt
tctaggtcaattgttaccactgatagttcaattaatattcctcaagagaaatctcaacaa
tcccctactgaagaaagtgaaagttcagctgcaactgttgttgattcagctgttgaaaga
gtgaatcatcagaaagaagtggaaagcgcttatttgagaaaagagcaggagaataaaatg
aagatgcgcaagtacagggacatgttaaaaactagagcttcacttcctattgctcagcta
aaaggtgatatattgcagctactgaaagataacaatgttcttgttgtttgtggggaaact
ggttctgggaagacaactcaggttccacaatttatcttggacgacatgattaactctgaa
cgcggtgggcattgtaatatcatttgcacacaacccagaagaatagcggctatttctgta
gctgaaagagtagccgatgagcgttgtgaatcttcacccggctcaaatgattccttggtt
ggttatcaagttcgtcttgatagtgcaaggaatgaaaaaacaaagcttttattttgtaca
acgggtatccttttgaggaaaattgcgggagacaaaaacttaactgggattacgcatgtc
atagttgatgaagtgcatgaacgctctcttttgggtgactttctacttattgttctgaag
aatctgattcagaagcaatcggctcagaaatctccaaaactgaaagttattcttatgtct
gcaactgttgattcagatttattttcaagatactttgatcactgccctgtgattactgca
caaggcagaacacatcccgtgacaacttactttctggaggatatatatgaaagtattaat
tatcggttggcttcagattctccagcatctgtaagatatggagcatctggaaaagagaag
agtggtccagtaaacaaccgaagaggaatgaaaaatcttgttatgcaagcatggggtgac
gatacaattctttctgaagaacgtgttaacccgtactatgtgccagagagttatcattca
tatagcgagcaaactcaacaaaatttgaaaagattgaatgaagatttcattgattatgat
cttctcgaagacttggtctgtcacatagacgaaacctgcagtgagggtgcaatacttgtt
ttcttgcctggagtgtttgaaattaacatgttagtggatatgctagctgcttcttatcga
ttcggtggaccatcttctgactggattcttccattacattcatctgttgcatcagctgat
caaaagagggtgttcttaagaccacccgagaacattcgtaaagtcattgtagccacaaat
attgccgagacgagtttgaccatagatgatgtggtgtatgttattgactgtggaaagcat
aaagagaatcgttataatccacagaagaaattgtcaagcatggttgaagactggatatct
caagcaaatgcaaggcaacgccgtggcagggctggacgtgtaaaacctggaatttgcttt
tgcttgtatacacgtcaccgtttcgaaaaacttatgcgaccttttcaggttccagaaatg
cttcgaactccattagtagagctgtgtttacaaataaaattactttctttgggattcata
aagccatttttgtctgaggctttggaacctcctaaagatgatgctatgaagtcggcaatt
tcattgttgtatgaggtcggtgctcttgaaggagatgagctccttactcctcttggacat
catttagctaaacttccagttgatgtattgattgggaagatgatgatatatggtggaata
tttggttgcctgtctcccgttctctcaatttcggcatttttgagtcacaagtctcctttt
gtctatccaaaagatgagagacaaaatgttgaaagggctaagttggcgcttctaactgat
aagcgggatggtcctactgattcatatgatgttgacaagaactctgaccatctgttaatg
atggttgcatatatgaaatgggaaaagattcttcgcgagaaaggggttaaagctgcacac
catttttgcagctcttattttttaagcagttcagttttgtacatgataagagatatgaga
atacagtttggaaccttgcttgcagatattgggctcatcagttttccaaaaaatttccag
gttggacggaagagagaaaacattgacatttggctttctgatccatcacagccattcaat
atgtattcacatcattcatcaatagtaaaggcagtattatgtgcaggtttatacccgaat
gttgctgccactgagaaaggaattgctggagcagcacttgggagccttaaacagtctatt
ggtttgactagtaatataatctggtacgatggaagaagagaagttcacatacacccttcg
tctatcaacagtaactggaaagaatttcgatatcctttccttgcgttccttgaaaaggtt
gaaaccaacaaagtgtttcttagagataccaccatcatatctccatactcgattttgcta
tttggtggttcaattaacgtccagcatcagaccgggcttgtcatcattgatggatggtta
aaattggcagcaccagcccaaattgctgttctgttcaaggaacttcggttgactcttcat
tctattttaaaggacttaataagaaaaccagagaatgtgaatgttggttctgacaaggtt
attagctccataattcatttattattggaagaagacaaaccaccagcatga
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integrated database retrieval system
