Cannabis sativa (hemp): 115719693
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Entry
115719693 CDS
T08987
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115719693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115719693
03009 Ribosome biogenesis [BR:
csav03009
]
115719693
04131 Membrane trafficking [BR:
csav04131
]
115719693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csav04147
]
115719693
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115719693
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115719693
Membrane trafficking [BR:
csav04131
]
SNARE
SNARE associated proteins
Others
115719693
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115719693
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115719693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
AAA_17
AAA_18
Parvo_NS1
ATPase_2
IstB_IS21
ABC_tran
Vps4_C
AAA_7
Viral_helicase1
NB-ARC
AAA_24
NACHT
TsaE
DUF815
Zeta_toxin
AAA_lid_PRS2_C
Zot
Motif
Other DBs
NCBI-GeneID:
115719693
NCBI-ProteinID:
XP_030504698
UniProt:
A0A803Q0E9
LinkDB
All DBs
Position
2:17447379..17452049
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AA seq
803 aa
AA seq
DB search
MTDKAESSETKKDFSTAILERKKSPNRLVVDEAINDDNSVVSIHPNTMEKLQLFRGDTIL
IKGKKRKDTVCIALADDTCEEAKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILP
VDDTIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETEPGEYCVVSP
DTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK
GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS
IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRR
FGRFDREIDIGVPDEIGRLEVLRIHTKNMKLSDDVDLERISKETHGYVGADLAALCTEAA
LQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWDDV
GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF
ISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSSGDAGGAADR
VLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKA
NLRKSPISKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRKDNPEA
MDEDMEEDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAESA
TGGSGSDPFAASAGAAEEDDLYS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaagctgaatcatccgaaaccaagaaggatttctcaacggctattctggag
cgtaagaagtcgccgaaccgattggttgtggatgaggctattaatgacgacaactccgtc
gtttcgattcaccctaataccatggaaaagttgcagcttttccgtggagatacgatcctc
atcaagggaaagaaacgaaaggatactgtatgcattgcacttgctgatgatacctgtgag
gaggcaaagatcaggatgaacaaggtcgttagatcaaatttaagagttcgtcttggtgat
gtggtgtctgtacaccaatgccctgatgttaagtatggaaagcgtgtccacatactgcca
gtggatgatactattgaaggtgttacggggaatctgtttgatgctttcttgaaaccttac
tttttggaagcctatcgtccagtgcgaaagggggatctgtttcttgtaaggggagggatg
agaagcgtggagttcaaagtcatcgaaactgaacctggggagtattgtgtggtttctcca
gacactgaaatcttctgcgagggggagcctgttaaaagggaggatgaggaacggttggat
gaagttggttatgatgatgttggtggtgtaaggaagcagatggctcaaatccgggagtta
gtggagcttccactaaggcatcctcaactttttaaatcaattggagtgaaaccgcccaaa
ggaattcttctttatggacctccaggttctggaaagacactgatagctagagctgtggct
aatgagactggtgctttcttcttctgtattaatggtcctgagatcatgtctaaattggcc
ggagaaagtgaaagcaatctcagaaaggcatttgaagaagctgagaagaatgccccgtcc
atcattttcattgatgagattgattcaattgctcctaagcgtgagaaaactcatggggaa
gtcgagaggcgcattgtttcacagcttctgactttgatggatgggctgaaatctcgtgct
catgttattgtcatgggtgctacaaatcgtccaaatagtatcgatccagctttgagaagg
tttggcaggtttgacagggagatagatattggggttccagatgaaattggccgccttgaa
gttctgcgtatacataccaagaacatgaaactgtctgatgatgttgacttggaaagaatc
tcaaaagaaacccatggatatgttggagctgatcttgctgctctctgcactgaagctgca
ctgcaatgtattagagagaaaatggatgtgatagacttggaagatgaaactattgatgct
gagatactaaattccatggctgtcacgaatgagcacttccaaactgcacttggaacaagc
aatccttctgcattgcgtgaaacggttgttgaagtccccaatgtcagctgggatgatgtt
ggaggtcttgagaatgttaagcgggagcttcaggagactgttcaatatcctgttgagcac
cctgagaagtttgagaaatttggcatgtcaccttccaaaggagtcctcttctacggaccc
cctggatgtggaaaaactctgctggctaaggcaattgcaaatgagtgtcaagcaaatttc
atcagtatcaaaggtcctgaattgctcactatgtggtttggggagagtgaagccaatgtt
cgagaaatttttgacaaggctcgaggatctgcaccatgtgtcctgttctttgacgagctt
gactctattgctacccagagagggagcagtagtggagatgctggtggtgctgctgatagg
gttctgaatcaacttcttactgaaatggatggcatgtcagcaaagaaaactgtttttatc
attggagccactaaccgacctgatattatcgacccagctcttttgcgtccaggacgtcta
gatcaattaatttacattcctctccccgatgaagattcacgtcaccaaatctttaaagct
aacttgagaaagtcgccaatctcaaaagatgttgatttgagggctttggcaaagtatact
caaggcttcagtggagctgatatcacagagatatgtcagcgagcgtgcaaatacgccata
agggagaatatagaaaaggatatagagaaggaaagaaggagaaaggataatccagaggcc
atggatgaggacatggaggaggatgaagtgtcagagatcaaagctgcccatttcgaggag
tctatgaagtatgctaggaggagtgttagtgatgccgacatacgcaaataccaggcattt
gctcagaccttgcagcagtctcggggattcggaacagaatttaggtttgctgagtcggca
accgggggttctggttcagatccatttgcagcttctgctggtgcggctgaggaagatgat
ttgtatagctag
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