Cannabis sativa (hemp): 115719739
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Entry
115719739 CDS
T08987
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115719739
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csav00535
]
115719739
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115719739
Meiosis-specific proteins
Cohesin complex and associated proteins
115719739
Proteoglycans [BR:
csav00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
115719739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
Myosin_tail_1
Phage_lysis
Microp_apicomplexa_7
Motif
Other DBs
NCBI-GeneID:
115719739
NCBI-ProteinID:
XP_030504773
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Position
2:6803804..6818520
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AA seq
1203 aa
AA seq
DB search
MYIKQVIIEGFKSYKEQVATDPFSPKVNCVVGANGSGKTNFFHAIRFVLSDLYQNLRSED
RVALLHEGAGHQVTTAFVEILFDNSDNRIPVDKEEVRLRRTINQKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLRELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDARQKLA
EVEEARTRVSETSTKMYNSVLDAHEKSKDLDKAMKDLTKELNGLSKEKEAAEIQKTEAIK
KQTEVELDVKDLEEKMFGNTRAKNDAVRQLQLLQNEIQDSMNELEEISPLYDSQIMKEKE
ITKGIMEREKQLSILYQKQGRATQFSNKAARDKWLKKEIKDLNVVLTSNLNQEKKLQDEI
HRLSSELNEQDVYIEGRRTEIANLESFISQSREGFNHQKSLRDKLQDERKSLWGKETELS
AEIDKLRTEVEKAEKNLDHATPGEVRRGLNSVRRICREYKIPDVYGPIIELLHCDERFFT
AVEVTAGNSLFHVVVKTDDISTQIIKHLNALKGGRVTFIPLNRVKPPHVNYPKSSDVIPL
VDKLEFDKKYGDAFKQVFARTVICRDLDVATKVARKDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMNIVMQNTNSIKAKEDELEKVRFELQEIDKKITELVTEQQKIDAKRTHDKS
ELEQLKQDIANANKKKQLVSKALVKKEKSLADVQAQIDQLRASMAMKEAEMGTELIDHLT
PEERVLLSRLNPEIADLKEQLIKCKTDRIETESRKSELETNLTTNLKRRKQELEVIVSSA
ETDNLQGEVENKRQELHDARSAVQDATEQLKRVCASIGDRTKQLKKIKDEKTKLKNLEDN
YERTLQDEAKELEQLLSKRNMFLAKQEEFSRKIRELGPLSSDAFETYKRRNIKELNKMLH
KCTEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELEAGEEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHGDDDDEDGPREADVEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMIRRLADIANTQFITTTFRPELVKVSDKIYYVTHQNRVSFVKVASKDRALDFIEHDQSH
NVE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggtgataattgaaggatttaagagctacaaggaacaagttgctact
gacccttttagtccgaaggtcaattgtgttgttggtgctaatggctctggcaagactaac
tttttccatgcgatccgttttgtactaagtgacctctaccagaacctccgcagtgaagat
agggttgcactacttcatgaaggtgcaggccatcaagttactactgcatttgttgagatc
ttgtttgacaattcggacaatcgtattccggttgataaagaggaagtgcgcttgcgtaga
acaattaatcaaaagaaggatgaatatttcttggatggaaagcacatcacgaaaacagag
gttatgaatttactggaaagtgctgggttttctcgatccaatccttactatgttgtgcaa
caaggaaagatagcttcattaactttgatgaaagactctgagaggcttgatttactcaaa
gaaattggtggcactcgagtgtacgaggaaagacgtcgggaaagtttaaaaattatgcag
gaaactggtaataaaaggaagcagataattcaggttgttcagtacttagatgagagatta
agggaattagatgaggagaaagaggaattaaggaaatatcagcaacttgacaagcagcgt
aaatctctggaatacactatttatgacaaggaacttcatgatgctcggcagaagttggca
gaggtggaagaggcacgaacaagggtttctgaaacatctacaaaaatgtataatagtgtg
ctggatgcccatgaaaaatcgaaggacctggataaggcaatgaaagatttaacgaaagaa
cttaatggtttaagcaaggagaaagaagcagcagaaatccaaaaaacagaagcaataaag
aagcagacagaggttgagcttgatgtgaaggatcttgaggagaagatgtttggaaatact
cgagccaaaaatgatgctgtgaggcaacttcaacttctgcaaaatgaaattcaggactca
atgaatgagcttgaagaaataagtcctttgtatgatagtcaaatcatgaaggaaaaggag
attacaaaaggtataatggagcgtgagaagcaacttagcatcttatatcaaaagcaaggt
cgtgccacccaattctcgaataaagctgctcgtgacaaatggcttaaaaaggaaattaag
gatcttaatgttgttctgacttcaaacctgaatcaagagaaaaagcttcaggatgagatt
catcgccttagctccgagttgaatgagcaggatgtctacattgagggtcgcagaactgaa
attgctaatctggagtcctttatttctcagtctcgtgaaggtttcaatcatcaaaaatca
ctgagagacaagttgcaagatgagcggaagtccttgtggggaaaagaaactgaactttct
gctgaaattgataaactgagaacagaggttgagaaggcagaaaagaatctcgatcatgca
actcctggggaagtcagaagagggctaaattctgttagaaggatctgcagagagtataaa
attcctgacgtatatggtccaattatagagctccttcattgtgatgaaagatttttcact
gctgttgaagttactgctggaaacagcttattccatgtggtggttaaaactgatgatata
tcaacccagataattaagcacctgaacgcattgaaagggggacgagttacatttatacca
ctgaacagggtgaaaccaccacatgttaactatccaaagagttctgatgttataccactt
gtggacaagttggagtttgataagaaatatggagatgcttttaaacaggtttttgctaga
acagtgatttgtcgagatctagatgtggctacaaaggttgctcgtaaggatgggctagac
tgtataactttggaaggtgatcaagtgagcaagaaaggtggtatgactggtggattttat
gatcaccggagatcaaaattgaagtttatgaatattgtcatgcagaacaccaattctata
aaagcaaaggaagatgaattggaaaaagtcagatttgagcttcaagagatagacaagaaa
attacagaacttgtaactgagcagcagaaaattgatgcgaagcggactcatgataagtct
gagttagagcaacttaagcaggacattgcaaatgctaataagaagaaacaactagtgtcg
aaagctctggttaagaaggagaaatcacttgcagatgtgcaggctcaaattgatcagctt
agagccagtatggccatgaaagaggctgagatgggcacagagctcattgaccacttaact
ccagaggaaagggttcttctttcgagattgaaccctgaaattgcagatctcaaagaacag
ctaattaaatgcaagacagaccgtattgagactgaatcaaggaaatctgagcttgagact
aatttaacaaccaacctcaagaggcgaaagcaagaattggaggtcatagtatcttctgca
gaaactgacaatttgcaaggagaagttgaaaataagaggcaagaacttcatgatgctaga
tcagcagttcaggatgcaacagagcaacttaaaagagtatgtgcaagtataggggataga
acaaagcaactcaagaagatcaaagatgagaagaccaagctaaagaatttagaagacaac
tacgagagaacacttcaggatgaagctaaagagttagaacagctgttaagtaaaagaaac
atgttccttgctaaacaagaagagttctcaagaaaaatcagggagcttggtccattgtca
tcagatgcttttgaaacgtataagcggaggaacattaaagaactgaataaaatgttgcat
aagtgcactgagcaattgcagcaattcagtcatgtcaacaaaaaggcacttgatcagtat
gttaatttcacagaacaacgagaagaactccagaaaaggcaagctgaactggaggccggt
gaagagaaaattagagagcttatatctgttctagatcagagaaaggacgagtcgatagaa
cgtactttcaaaggtgttgccaggcacttcagagaagttttttctgagctagtacaaggt
gggcatggtcacctagtcatgatgaagaaaaaggacggtgaccatggtgatgatgatgat
gaagatggacctcgtgaagcagatgtggagggtagggttgagaaatacattggtgtgaaa
gttaaggtttcttttaccgggcaaggagaaactcagtccatgaagcaactatctgggggt
cagaaaactgttgttgcacttacacttatctttgccatccagcgatgcgatccagctcca
ttctatctttttgacgagatagatgccgctttggatcctcagtacaggactgctgtagga
aatatgattcgtcgcttggcagatattgcaaatactcaattcataaccacaacattccga
ccggagcttgtcaaagtttcagacaaaatatattatgtcacacatcaaaacagggtgagc
tttgttaaagttgcctccaaagatcgggcactggactttatcgagcatgaccagtctcac
aacgttgagtaa
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