Cannabis sativa (hemp): 115720319
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Entry
115720319 CDS
T08987
Name
(RefSeq) putative pectate lyase 14
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00040
Pentose and glucuronate interconversions
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115720319
Enzymes [BR:
csav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
115720319
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
115720319
NCBI-ProteinID:
XP_030505331
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Position
2:complement(9548653..9550355)
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AA seq
376 aa
AA seq
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MATVTKHSALVLIFVNLLALTSANNAIDNCWRKNPQWRRNRPQLATCSVGFAGKMSSGNA
GRGLIRYVVTNPSDENPLSPKPGTLRYGASMIKGKVWITFQRDMRITLQKPLLISSFTAI
DGRGVSVHIAGNACLVVVHASNVIIHGLHIHHCRAQGPSSVMGSEGNVVSMGQADGDAIR
LVGARKIWIDHNTLYQCQDGLVDVTRGSTEVTVSNNWFRDQDKVMLLGHDDGYSMDKNMK
VTVIYNHFGPNCNQRMPRIRHGYAHVANNLFRGWSQYAIGGSMSPSVKSEANIFIAPKSG
NKEVTWRMDTVGNKNSWKFYSVGDVFENGASFTGTGFMGANPNYNPQQNFKVANAKFVRS
LTSSAGVLRCTKRTKC
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgttacaaagcactctgctttggttctcatatttgtaaaccttctagctcta
accagcgccaacaatgccattgacaactgctggagaaaaaacccgcaatggaggcgaaac
cggccccaactcgccacctgctcagttggttttgctggaaagatgagtagtggcaatgca
ggaagaggtctcataagatacgtagtcacaaacccaagtgatgaaaaccccttaagtcca
aaacctgggacacttagatatggagctagtatgataaaaggaaaagtttggatcacattt
caaagggacatgcgtataactctccaaaagccactactcattagtagcttcacggccatt
gatggcagaggtgtgagtgttcacattgctggaaatgcttgccttgttgtggttcatgcg
agtaatgtgataatccatgggcttcatattcaccactgccgagcccagggcccgagcagt
gtgatgggttcggagggaaatgttgtgtcgatgggtcaggctgatggtgatgctattaga
ttggttggtgctaggaagatatggattgatcataatactctgtaccagtgccaagatgga
cttgttgatgttactcgtggctctacggaggtaactgtttcgaataattggtttagagac
caagacaaggttatgcttcttggtcatgatgatggttattctatggataagaatatgaag
gtcactgttatttataaccattttggtccaaattgtaatcagagaatgccaaggattcgg
catggttatgcacatgtggccaataacttgttcagaggttggagtcaatatgctattgga
ggaagcatgagcccaagtgtgaagagtgaagctaatatctttattgcacccaaatcgggg
aataaggaggtaacttggagaatggatacagttggaaacaagaattcatggaagttttat
tcagtgggagatgtatttgagaatggggcttcttttacaggaacagggtttatgggagca
aacccaaactataatcctcaacaaaatttcaaggttgcaaatgccaaatttgtgagatcc
ttaactagttcagctggtgttcttcggtgcactaaacgaactaaatgttga
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