Cannabis sativa (hemp): 115720700
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Entry
115720700 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115720700 isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115720700
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115720700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
115720700
NCBI-ProteinID:
XP_030505726
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Position
2:complement(89016518..89019388)
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AA seq
489 aa
AA seq
DB search
MENFREMETKDGFPAICSREIGFSRPIVFARRFSASEVIVKQLNLYGKLNGHKGCVNTVE
FNSSGDLLVSGSDDKQVMFWDWATKTRRLSYASGHHDNIFQARIMPFTNDRRVVTSAGDG
QIRLGQVLDDGQVHTKKLGRHQGRVYKLAVEPGSSHILYSCGEDGLVQHFDLRSSCATTL
VCCTSLKENNKQLQNSVISLNGIVIDPRNPNYLAVGGDDEYARVYDIRKCWQNSSKDLDE
PVDTFCPRHLVKDNSVNITGLAYSYTSELLVSYNDELIYLFQKNMGLGPIPSSSTSLEAT
QELEEPQVFIGHRNSQTVKGVSFFGPNDDYVLSGSDCGHIFIWSKKGAKLVRLMKGDRRI
LNQLEPHPHKPFFATCGIESSVKLWAPMETGVPPLPENVQKIMDSNRRGRENQSRVVMTP
DVIMHLLRLQRRQAMVYVERRYNSADTESGDEENAEPSGLGSSVDYGNTLPEDNNDDDSD
ESSRDCNIS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttcagagaaatggaaactaaagatgggtttcccgcaatttgcagtagagag
ataggtttctctcgcccaatcgtcttcgctcgccgattttctgcttctgaggttattgtg
aagcagttgaatctctatgggaaactaaatggtcataagggctgtgtaaatacagttgaa
ttcaactccagtggagatctccttgtgtcgggttctgatgacaagcaggttatgttttgg
gattgggcgactaagactcgaagattgtcatatgcttctggccaccatgacaacatattc
caagctagaatcatgccgtttactaatgatcgtcgtgtagtaacttctgctggagatgga
cagataaggcttggtcaggtcttggatgatggtcaagtacatacaaaaaagttggggagg
catcaaggccgagtatacaagctcgctgttgagccaggaagttcacacatattatatagt
tgtggagaagatggtcttgttcaacattttgatctgcgaagtagttgtgctacaacactc
gtttgttgcacttcgttaaaagaaaacaacaagcagcttcaaaacagtgttataagttta
aatggcattgtaattgaccccagaaatccaaattacttggccgtaggaggtgatgatgaa
tatgcacgtgtatacgacataaggaaatgttggcaaaattcttcgaaggatttggatgaa
ccagttgacacattttgtccccgtcacttggtgaaggacaatagtgttaacataacaggg
ctggcttactcttacacaagcgaactacttgtctcttacaatgatgagctcatttatctg
tttcagaagaacatgggattaggcccgataccatcatcttccacctcgcttgaggccaca
caggaattagaagaaccacaggttttcattggtcacaggaattcacaaacagttaaagga
gtgagtttctttggccccaatgatgactatgtgttgagcggttctgattgcggtcatata
ttcatatggagtaaaaagggagctaaactcgtgcgcttaatgaaaggtgatcgacgcatt
ttaaatcaactcgagcctcatccccacaagcccttttttgcaacatgtggaatagagagc
agtgtaaagctctgggctcctatggaaaccggtgttcctccacttcccgaaaatgtacag
aagataatggattcgaacagacggggcagagagaaccaatcaagggtggtcatgactcct
gatgttatcatgcatttgttgcgtctgcagagaaggcaagcaatggtttacgttgaaaga
agatacaatagtgctgataccgagagtggcgatgaagaaaatgcagagccttctggttta
ggatcctctgttgactatggcaataccttgcctgaagacaataacgatgatgattcagat
gaaagttccagggactgtaacattagctag
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