Cannabis sativa (hemp): 115720734
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Entry
115720734 CDS
T08987
Name
(RefSeq) RNA-binding protein BRN1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115720734
Spliceosome [BR:
csav03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115720734
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
TYA
Motif
Other DBs
NCBI-GeneID:
115720734
NCBI-ProteinID:
XP_030505801
UniProt:
A0A803NQD6
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Position
X:complement(17767356..17771279)
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AA seq
436 aa
AA seq
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MAEGKKERKSSSEESVKLFVGQVPKHMTEAQLLTMFQEFSLVDEVNIIKDKVTRASRGCC
FVICPSRQEADKAVNACHNKKTLPGASTPLQVKYADGELERLEHKLFVGMLPKNVSEAEV
SALFSTYGTIKDLQILRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVK
WADTEKERQVRKAQKAQSQASNVPNADSQHPSLFGALPIGYAPPYNGYGYQAPGTYGLMQ
YRLSPMQSQPGYHNMMPQVNQGNALRGISPDLAPNMAPRNFGMPPHPNYVGSAYPAMPGL
QHPMHYPGGMMSPRPLSGSPGSVHAVVSSNPATSPGSSKNSGGQVEGPPGANLFIYHIPQ
EYGDQDLATAFQAFGRVLSAKVFVDKATGVSKCFGFVSYDAPDAAQSAISMMNGYQLGGK
KLKVQLKRDNKPNKPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggaagaaagagagaaaatcgagcagtgaggagagcgtgaagctgttcgtt
ggtcaggtgccgaagcacatgaccgaagctcagcttctcacaatgtttcaagagttttct
ctggtcgacgaggtcaacatcatcaaagacaaggtcacccgtgcctctcgagggtgttgt
tttgtcatatgtccgtcgagacaggaggcagataaagccgtcaatgcgtgtcataataag
aaaacgctacctggggcatctactccgttgcaagtgaagtatgctgatggcgagttggaa
aggctagaacacaaactttttgttggtatgcttccaaagaatgtttctgaagctgaagtt
tctgctcttttctctacatatggaaccataaaggacttgcaaatattaagaggttctcag
caaactagtaaaggttgtgcctttctaaaatatgagacgaaagagcaagctcttgcagcc
ctggaggctatcaatgggaagcacaaaatggagggttcaagtgttcctttggttgtcaaa
tgggcagatacggaaaaagaaaggcaagtgcgaaaggctcaaaaagctcaatcccaggca
tctaatgtgccaaatgctgattcacagcatccttcactatttggagccttaccaattggc
tatgctccaccctataatggctatggttatcaggctcctggaacttatggtctcatgcag
tatcgcctatcaccaatgcagagtcaacccggttatcataatatgatgcctcaagtaaac
caaggaaatgcattaaggggaatcagtcctgatcttgccccgaatatggctccgagaaat
ttcggtatgcccccccatccaaattatgtggggtcagcttatcctgcaatgccagggctt
cagcatcccatgcattatcctggaggaatgatgagtccccgaccattaagtggttcccct
gggtcagtgcatgcagttgtaagcagtaaccctgcaacatctccagggtcaagtaaaaat
tctgggggtcaagttgaaggtccacctggtgccaatttatttatttatcatatacctcaa
gagtatggagatcaagatcttgccactgcttttcaagcttttggtagggtcttgagtgct
aaggtttttgttgataaagcaaccggcgtcagcaaatgtttcggatttgtaagttatgac
gccccagatgctgcccaatctgccattagtatgatgaatggttatcaattagggggcaag
aaattaaaggttcaactaaaaagagacaacaaaccgaacaaaccatattga
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