Cannabis sativa (hemp): 115720863
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Entry
115720863 CDS
T08987
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase isoform X1
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115720863
Enzymes [BR:
csav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
115720863
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
115720863
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
Ubie_methyltran
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
115720863
NCBI-ProteinID:
XP_030505911
LinkDB
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Position
2:2202603..2205485
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AA seq
383 aa
AA seq
DB search
MFFDFIRARASKNFYLPVDNICLPITKFGKVYYLGFSGTMRDIKVKGTSNLCTTSTTVSD
GESHVAQSELIMDKETSSLGVKQTPEIEKKFVHRVYDAIAPHFSSTRYAKWPKVAAFLSS
LASGSLILDAGCGNGKYLGLNPDCFFIGCDISYPLIKICADRGSEVLVADAVNLPYRTGF
GDAAISIAVLHHLSTESRRKKAIEELVRVVKKGGLVLITVWAAEQEDRSLLAKWTPLNQK
YVAEWIGPGSPRDRNSPSPFKLKSIPETEERNLGKVKDSKEITSRSEDDSVASDDASNIN
NQEYFIPWHLPYHRAEVGGASACAVENGFAKKDDKKGAVVYNRYYHVFSEGELERLVVGM
ENAVVVDRFFDKSNWCIVLQKTS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgttctttgattttataagagctagagctagtaagaacttttatctgcctgtggataac
atctgcctacccattaccaaatttggtaaagtatattacttgggattttcaggtaccatg
agagatatcaaagtaaaaggaacttctaacctgtgtactacttctactactgtatctgat
ggagaatctcatgtagcgcaatctgagttaatcatggacaaagagacatcatcccttggt
gtgaaacaaactcctgaaattgaaaaaaagtttgtgcatcgtgtttatgatgccatagca
cctcattttagctccacacggtatgccaagtggccaaaagttgctgcctttttgtcatcc
ttggcctctggatctcttatcttggatgctggatgtggtaatgggaagtacttgggattg
aatcctgattgtttctttataggatgtgatataagctatcccctcattaagatctgtgca
gatagagggagtgaagttttggtagctgatgctgtaaatcttccatacaggactggtttt
ggtgatgctgcaatctccatagctgtgttacatcatctaagcacagagagtaggagaaag
aaagcaattgaagaacttgtccgagttgtgaaaaagggtggtctagttctaataacggtt
tgggctgcagagcaagaggatagatcattgcttgctaaatggactccacttaaccaaaag
tatgtggcagagtggataggtcctggcagtcctcgagatcgcaatagtccttcacccttc
aaattgaaaagtattcctgaaaccgaggagaggaatttaggaaaagtaaaagattccaag
gaaataacttctcgaagtgaagatgatagtgtagcttctgatgatgcgagcaatatcaat
aatcaagaatattttatcccttggcacttgccttatcatcgggccgaagttggcggcgct
tctgcttgtgctgtcgaaaatggctttgcaaagaaagatgataaaaagggtgctgtagta
tacaaccgatattaccatgtcttcagcgaaggcgagcttgaaagattagtagttggcatg
gagaatgctgttgttgttgaccgatttttcgataaatcgaactggtgcatcgttcttcaa
aagacatcatga
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