Cannabis sativa (hemp): 115721067
Help
Entry
115721067 CDS
T08987
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115721067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115721067
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115721067
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115721067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
115721067
NCBI-ProteinID:
XP_060965968
LinkDB
All DBs
Position
2:5778606..5782482
Genome browser
AA seq
277 aa
AA seq
DB search
MAIATAITQVVIREVWRENLLEEFQLIGKLIHDRYRYISFDTEFPGCVFRPPTIPNRHYK
IHPIDQYRLIKQNVDILNLIQLGLTLTDSDGNFPDLGGQTSVVWQFNFCDFDINRHRCAL
DSIDLLKKQGIDFERNLTHGINSAHFANLMYHYRLVFNRDITWITFHSAYDFGYLVKILT
GCFLPHFLPDFLYLVSHFFGQNVYDMKYMMGFFPGLYGGLESLASTLQIVREVGLSHQAG
SDSLLTWRTFQKMRLTCFDSDQKELRKYAGVLYGLKI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcaatagcgacagcaatcactcaagtagtcatccgagaggtatggagagaaaatctc
cttgaagagtttcaactgatcgggaaattgattcacgatcgttatcgttacatttcattc
gatactgagtttccaggctgtgtatttcgacctccaacaatccccaatcgccattacaaa
attcaccccattgatcagtaccgactgatcaaacagaatgtggatattctcaatctcatc
caattgggtctcacccttaccgattccgacggtaactttcctgacctcggcggccaaaca
tcggtggtttggcaatttaacttctgtgatttcgacataaaccgccataggtgcgcacta
gattctatagatttgttaaagaaacaggggatagatttcgagagaaatctcacccacgga
atcaactctgcccactttgctaatctgatgtaccactataggctcgtgttcaacagagat
attacatggattaccttccacagtgcctatgattttgggtatttggtaaagattcttact
ggttgtttccttcctcactttttgcctgattttctatatctcgtgagccacttctttggt
caaaatgtgtatgacatgaagtacatgatgggtttttttcctggtctgtatggtggtttg
gaaagtctggctagtacattgcagatcgtaagggaagttgggttgagccatcaggctggt
tcggatagtttgctcacatggaggacttttcaaaagatgagattgacctgttttgactct
gatcaaaaggagttgaggaagtatgctggtgttttgtatggcttaaaaatttga
DBGET
integrated database retrieval system
