Cannabis sativa (hemp): 115721081
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Entry
115721081 CDS
T08987
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115721081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115721081
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115721081
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115721081
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
115721081
NCBI-ProteinID:
XP_030506185
LinkDB
All DBs
Position
2:complement(5908713..5909743)
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AA seq
277 aa
AA seq
DB search
MAIARAITQVVIREVWRENLLEEFQLIGKLIHDRYRYISFDTEFPGCVFRPPTIPNRHYK
IHPIDQYRLIKQNVDILNLIQLGLTLTDSDGNFPDLGGQTSVVWQFNFCDFDINRHRCAH
DSIDLLKKQGIDFERNLTHGINSAHFANLMYHYRLVFNSDITWITFHSAYDFGYLVKILT
GCFLPHHLPDFLYLVRYFFGQNVYDMKYMMGFFPGLYGGLESLAGTLQIVREVGLSHQAG
SDSLLTWRTFQKMRLTCFDSDEKELRKYGGVLYGLKI
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggctatagccagagcaatcactcaagtagtcatccgagaggtatggagagaaaatctc
cttgaagagtttcaactgatcgggaaattgattcacgatcgttatcgttacatttcattc
gatactgagtttccaggctgtgtatttcgacctccaacaatccccaatcgccattacaaa
attcaccccattgatcagtaccgactgatcaaacagaatgtggatattctcaatctcatc
caattgggtctcaccctcaccgattccgacggtaactttcctgacctcggcggccaaaca
tcggtggtttggcaatttaatttttgtgattttgacataaaccgccataggtgcgcacac
gattctatagatttgttgaagaaacaggggatagatttcgagagaaacctcacccacgga
atcaactctgcccactttgctaatctcatgtatcactataggctcgtgttcaacagcgat
attacatggattaccttccacagtgcctatgattttgggtatttggtaaagattcttact
ggttgtttccttcctcaccatttgcctgattttctatacctggtgagatacttctttggt
caaaatgtgtacgacatgaagtacatgatgggtttctttcctggtctgtatgggggtttg
gaaagtctagctggcacattgcagatcgtaagggaagttgggttgagccatcaagctggt
tcggatagtttgctcacatggaggacttttcagaagatgagattgacttgttttgactct
gatgaaaaagagttgaggaagtatggtggtgttttgtatggcttaaaaatttga
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