Cannabis sativa (hemp): 115721093
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Entry
115721093 CDS
T08987
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115721093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115721093
03110 Chaperones and folding catalysts [BR:
csav03110
]
115721093
03029 Mitochondrial biogenesis [BR:
csav03029
]
115721093
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csav04147
]
115721093
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115721093
Messenger RNA biogenesis [BR:
csav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115721093
Chaperones and folding catalysts [BR:
csav03110
]
Heat shock proteins
HSP60 / Chaperonin
115721093
Mitochondrial biogenesis [BR:
csav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115721093
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115721093
Exosomal proteins of other body fluids (saliva and urine)
115721093
Exosomal proteins of breast cancer cells
115721093
Exosomal proteins of colorectal cancer cells
115721093
Exosomal proteins of bladder cancer cells
115721093
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
DUF7902
Motif
Other DBs
NCBI-GeneID:
115721093
NCBI-ProteinID:
XP_030506197
UniProt:
A0A803PZ77
LinkDB
All DBs
Position
2:complement(18016611..18019897)
Genome browser
AA seq
585 aa
AA seq
DB search
MASANALSPASIFCSPVKGLSRRVSQQQSSRLNYKQSSRRFVVKANAKDIAFDQHSRAAL
QAGIDKLADAVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVQGLIVELEKKARP
VKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLIAEFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTGE
ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENTSVEQL
GVARKVTITKDSTTLIADAASKDELQARVAQLKKELAETDSVYDTEKLAERIAKLSGGVA
VIKVGAATESELEDRKLRIEDAKNATFAAIEEGIVPGGGAALIHLSDSVPAIKEQLEDAD
ERLGADIVQKALLAPASLIAQNAGVEGEVVVEKIKSSEWEVGYNAMTDTYENLVDAGVID
PAKVTRCALQNSASVAGMVLTTQAIVVEKAKPKAPVGAPPQGLTV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggctaatgctctttctccggcgtccattttctgctctcccgtgaagggtttg
agtaggagggttagccagcagcagagcagtaggttgaactacaagcaatctagcagacga
tttgttgttaaagctaatgcgaaggacatagcctttgaccaacactcgagggctgcactt
caggcaggcattgataaactcgctgacgctgttggccttactcttggtcctagggggagg
aatgttgttttggatgagtacggtagtcctaaagtggttaatgatggagttacaatagct
cgtgccatagagctacctgatgctatggaaaatgctggagcagctctcatccgagaggtt
gctagtaaaactaatgactctgctggtgacgggacaacaactgcatcagttcttgcgagg
gaaataattaagcttgggcttttgagtgttacctctggtgcaaatccagtgtcccttaag
agagggattgacaaaactgtgcagggtttgatagttgagttggagaagaaggctagacct
gttaagggtcgtgatgatatcaaagctgttgccaccatttctgctgggaatgacgaactt
atcggaacaatgattgctgatgcaattgacaaggttggccctgatggtgttttgtctatt
gagtcttcgtcttcatttgaaacaactgttgaagttgaagaaggcatggagattgacagg
ggttatatttcccctcagttcgttactaacccagagaaattgattgctgaatttgaaaat
gccagagtcttggtgaccgatcagaagatttcagctattaaggacataattccattgttg
gagaaaaccacccaattgagatcccctttgcttataattgctgaggatgtgaccggggag
gctttggcgactcttgttgtgaacaagttgcgaggcatattgaatgttgctgccatcaag
gctcctggttttggtgaacggagaaaggctcttcttcaggatattgctattttgacagga
gccgagtttcaagccagcgatctgggtttgcttattgagaacacctcagtggagcagctc
ggtgtggcaagaaaggtgaccatcactaaggattccaccaccctcattgccgatgcagca
tcaaaagatgagttgcaagctagggttgctcagttgaaaaaagagttggcagagacagat
tctgtttatgacactgagaaattggctgaaagaattgccaaattgtcgggaggagttgca
gtcataaaggtgggagctgccacagagtctgagcttgaggaccgcaagcttcgtattgag
gatgccaagaatgcaacttttgcagctatcgaggaaggaattgtacctggtggtggtgcc
gctttaattcatctctctgattctgttcctgcaatcaaggagcaacttgaagatgctgat
gagcggctaggtgctgatatcgtgcaaaaggcattgttagcaccagcttcattaatagct
caaaatgctggagttgaaggtgaagtagtagtggagaaaatcaaatcaagtgaatgggag
gtcggttacaatgcaatgactgacacatatgaaaacttggttgatgccggtgttattgat
ccagctaaggttacaaggtgtgctcttcaaaactcggcttcagttgctggaatggtgctg
accactcaggccatagtggtggagaaggctaaacccaaggcacccgtgggcgctccacca
cagggacttactgtctag
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