KEGG   Cannabis sativa (hemp): 115721098
Entry
115721098         CDS       T08987                                 
Name
(RefSeq) protein DAMAGED DNA-BINDING 2
  KO
K10140  DNA damage-binding protein 2
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03420  Nucleotide excision repair
csav04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115721098
  09124 Replication and repair
   03420 Nucleotide excision repair
    115721098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csav04121]
    115721098
   03400 DNA repair and recombination proteins [BR:csav03400]
    115721098
Ubiquitin system [BR:csav04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     115721098
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115721098
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st EIF3I WD_LRWD1 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 PQQ_3 WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 115721098
NCBI-ProteinID: XP_030506205
LinkDB
Position
2:complement(57841338..57845998)
AA seq 552 aa
MAPQTRRTTSFPRVIIDNDTDSEQSSSEEEEEEQVEEEEDVAVRNNGMEPEQSLDPKNKG
KAPICISLKKVCKVCKKAGHEAGFKGATYIDCPMKPCFLCKMPGHTTMSCPHRIATEFGV
IPASHKCSSNQLFYVFERQLGHTRSQVKPVRIIPDQVCCAVIRYHSRRVTTLEFHPTNNN
ILLSGDKKGQVGVWDFGKVYEKIVYGNIHSCIVNNMRFSPANDGTVYAASSDGTISCTDL
ETGISLSLLNLNPDGWQGPNSWRMLYGMDLNKERNAVLVADNFGYLYSVDIRSNTKTGEA
ILIHKRGSKVVGLHCNPVQPDLLLSCGNDHYARIWDMRHIEARSSLYELSHKRVVNSAYF
SPLSGSKIVTTSQDNRLRVWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKDPSESL
VVIGRYISENYNGAALHPIDFIDISTGQLVAEVIDPNITTISPVNKLHPREDILVTGSSR
SLFVWRPKESESVEPKDEGKIVVCGKDMKRGGGHGDESDNSDGDTFSSKKKNSKGKKSNL
KSYKSINKKVKR
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggcccctcaaaccaggagaacgacgtcgtttccgcgtgtgatcattgataatgataca
gactctgaacaaagttcgtccgaagaagaggaagaagagcaagtggaggaagaagaggat
gttgccgtgaggaataatggaatggaacccgaacagtctttggaccccaagaacaaagga
aaagcacccatctgtattagtctcaagaaagtttgcaaagtatgcaaaaaggcgggacat
gaagcggggttcaaaggagctacttacattgattgtccgatgaaaccatgcttcctctgt
aaaatgcctggtcacactacaatgtcatgcccacatcgaattgcaaccgagtttggggtc
atccctgcatcccataaatgtagcagtaaccaattgttctatgtctttgagcgccagctt
ggacatacgcgatcccaggtcaaaccagtgcgcatcattccagatcaagtttgctgtgca
gttattagataccacagtagacgagtcacaaccttggaatttcacccaacaaataataac
atccttttatctggtgataagaaaggacaagttggagtgtgggattttggtaaagtatat
gagaagattgtatatggaaacatacactcttgtattgtcaataacatgagatttagtcca
gcaaatgatggtacggtttatgctgcatcatcagatggaaccattagctgcactgacttg
gagactgggatttcattatcccttctgaaccttaaccctgatggttggcagggcccaaac
agctggaggatgttgtatggcatggatcttaacaaagagagaaatgctgtgctagttgct
gataactttggttatctctactcggtggatattcgctccaacactaaaactggtgaggca
attttgatccataagagagggagcaaagttgttggactccattgtaaccctgttcagcca
gatcttctcttgagttgtggaaatgatcactatgcccgaatatgggacatgcgtcatatt
gaagcacgttcttcattatatgagctatcacacaaacgtgttgttaattctgcatatttc
tccccactatcaggaagcaaaattgttaccacttcgcaggataatcgtcttcgtgtatgg
gactctatatttggcaatctagattccccaagccgagagattgtacacagtcatgatttt
aatcgtcacttgactccttttcgagctgagtgggatccaaaggacccatctgagtccctt
gttgttataggtcgttacataagcgaaaactataatggtgctgccctgcatcccattgat
ttcattgacattagcacaggccaactagttgctgaggttattgatccaaatattacaact
attagccctgtaaacaagctacatccacgggaggacattttggtaactggtagttcaagg
tctctttttgtctggcggccaaaggagtctgagagtgtggaaccgaaagatgaaggaaag
attgtagtttgtggtaaagacatgaagcgcggtggtggtcatggggatgaaagcgataat
tctgatggtgacacattcagctccaagaaaaagaactcgaaaggtaaaaaatccaatctt
aaatcttacaagtcgataaataagaaggtcaaacgctaa

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