Cannabis sativa (hemp): 115721371
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Entry
115721371 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115721371
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115721371
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115721371
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115721371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
115721371
NCBI-ProteinID:
XP_030506515
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All DBs
Position
2:53343114..53345288
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AA seq
383 aa
AA seq
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MRQRKVRQEVSETLVKESTVGDGEINKGFFACYLLVSLNPRHKSHTYIGFTVNPRRRIRQ
HNGEIGCGAFRTKKKRPWEMVLCIYGFPTNVSALQFEWAWQHPTESLAVRKAAASFKSLS
GIANKIKLAYTMLTLPSWQSMKLTVNFFSTKYTKHSAGCPSLPGHMRVKVCPMDELPCYV
EWDGSLNGNEDEWDNEELDGGACDATKFSEDTSSDSIQENSEEDDNNGFEKIISELCESI
NEGEGSKKQSSFSEMTGRPSSNVSSSSFTREDIGVAEDTVSSGINKHKNFELKRPAMEQS
APLVIEDYDEPPRKRYIVPSEVEVIDVRTPSPVVCRSSLWGSNFCQRERNKERHTTLPSE
TEVIDLTSPSPLCRSSLWVSLID
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagagaaaggtgcggcaagaggtctcagaaaccctagtaaaggaatctacagta
ggcgatggagaaattaacaaagggttcttcgcttgctacctactggtctccctcaatcct
cgtcacaaaagccacacctatattggattcactgtgaatccacggcgtcgtatcaggcaa
cacaacggcgagatcggttgtggtgcattccgaaccaagaagaaacgcccttgggagatg
gtcttatgcatctatggcttcccaactaacgtttctgctttgcagtttgagtgggcttgg
cagcacccgacagaatccttggcggtaaggaaggcggccgcaagctttaaatcactctct
ggaattgctaataagattaagcttgcatacacaatgcttacactcccatcttggcagagt
atgaaactcactgtgaactttttctcgacaaagtacacaaaacattctgctggctgtcca
agcttgccaggacacatgagggttaaggtttgccccatggatgagcttccttgctatgtt
gaatgggatggaagcttgaatggaaatgaagatgaatgggataatgaagaattggatgga
ggagcttgtgatgctactaaattttcagaggacacatcttcagattctatacaggaaaat
tcagaagaagatgataataatgggtttgagaagattattagtgaactgtgtgaatctatt
aacgaaggagaaggtagtaaaaaacagtctagcttttcagaaatgactggaagaccatcc
tcaaatgttagcagtagctcatttacaagagaagatattggtgttgctgaagatacagtt
tcctctgggattaacaaacataagaattttgaactgaaacgaccagcaatggaacaatct
gcacctctagtgattgaggattatgatgaaccacctagaaagcgttacattgtgcccagc
gaagtagaggtgatagatgtaaggactccgtctccagttgtgtgcagaagtagtttgtgg
ggcagtaacttctgtcaaagagagaggaataaagaacgccatactactctacctagtgaa
acagaggttatagatttaacgagtccatcacctctgtgtagaagtagtttatgggttagt
ttgattgactaa
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