Cannabis sativa (hemp): 115721763
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Entry
115721763 CDS
T08987
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
KO
K15171
transcription elongation factor SPT4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115721763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csav03021
]
115721763
03019 Messenger RNA biogenesis [BR:
csav03019
]
115721763
Transcription machinery [BR:
csav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
115721763
RNA polymerase I system
115721763
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
115721763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
115721763
NCBI-ProteinID:
XP_030506699
UniProt:
A0AB40ECX0
LinkDB
All DBs
Position
9:complement(21567130..21569353)
Genome browser
AA seq
116 aa
AA seq
DB search
MGTAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN
GIISVMDPTRSWAARWLRIGKFAPGCYTLAVSEALPEDLQNLCEDERVQYVPPKRV
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgggaactgctcccgcccaaattccgacgagcttcggccacgaactaagggcctgcctt
cgttgccgccttgtcaagacttatgatcagttcagagaatcgggttgtgaaaactgcccc
ttcttcaagatggacgaagatcacgagcgtgtcgtcgattgcaccactcctaatttcaat
ggcataatatcagtgatggatcctaccagaagttgggctgctcgctggttgagaatcggc
aaatttgcccctggctgttacactcttgccgtctcagaggcattacctgaggacttgcag
aacttatgcgaagacgagcgagttcagtatgtgcctccgaaacgcgtgtga
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