Cannabis sativa (hemp): 115722013
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Entry
115722013 CDS
T08987
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00071
Fatty acid degradation
csav00280
Valine, leucine and isoleucine degradation
csav01100
Metabolic pathways
csav01110
Biosynthesis of secondary metabolites
csav01212
Fatty acid metabolism
Module
csav_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
115722013
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
115722013
Enzymes [BR:
csav01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
115722013
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Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
EcKL
Motif
Other DBs
NCBI-GeneID:
115722013
NCBI-ProteinID:
XP_030506992
LinkDB
All DBs
Position
9:complement(5249516..5255517)
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AA seq
830 aa
AA seq
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MAKRISDLVGRVHPSLDFDRQKLLQYASANVHGFPHSPTTFTLSQFGHGQSNPTYLIEVG
SGSSLNRYVLRKKPPGKLLESAHAVEREFQVLQALGAHSQVPVPKVFCLCTDPSVIGTAF
YIMEYLEGRIFIDPRLPGVAPESRRELYKATAKALASIHNADVDAMGLGKYGRRDNYCKR
QVDRWARQYIASTGKGKPAGNPKMFELIDWLRQHIPLEDSSGAVGGLVHGDFRLDNLVFH
PVENRVIGILDWELSTLGNQMCDVAYSSMHYVNDLAVDKSQISEGMELTGIPEGIPSLAE
YLAEYCSLTHKPWPAAVWKFYVAFSLFRGASIFAGIYSRWILGNASAGERAQHSGDKANA
LIDAAWAFINRDYVLPNSPPSSAFVQKNILEPSENASKDQVFSGTGRFVPSEKVMELRNK
LIKFMEDHIYPMENEFYGLAQSGSRWTVHPEEERLKELAKKAGLWNLWIPFDSAERAKKL
IFGGSNYHSSGGTFNQLLGEGLSNLEYGYLCEIMGRSVWAPQIFNCGAPDTGNMEVLLRY
GNKEQQLEWLIPLLEGKIRSGFAMTEPKVASSDATNIECSIKRQGDSYVINGTKWWTSGA
MDPRCRLLIVMGKTDFNAANHKQQSMILVDIKTPGVHVKRPLMVFGFDDAPHGHAEVSFE
NVRVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGSAERGMQLMAQRALSRTVFGKLI
AEQGSFLSDLAKCRIELEKARLLVFEAANQLDILGNKRARGTIAMAKVAAPNMALKVLDM
AMQVHGAAGLSSDTVLSHLWATARTLRIADGPDEVHLGTIAKLELRKAKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacgtatatcggatcttgttgggcgagtccacccaagtctggattttgatcgt
caaaagttgctccaatacgcctccgccaacgtccatggcttccctcattctcccactact
ttcacactctctcagttcgggcatggtcaatcgaatcctacttatcttattgaagtgggt
tctgggtcttcgttgaatcgctatgttctgaggaagaagcctcctgggaagttgctggag
tctgctcatgccgtcgagagagagtttcaggttcttcaggcattaggagctcattcacaa
gttccagtccctaaagttttttgtttgtgtactgatcctagtgtcattgggactgctttt
tacatcatggaatatttggagggacgcatttttattgaccccaggctaccgggtgttgcc
cctgaaagtagaagggagttatacaaagcaactgcgaaagctttagcttctatacataat
gcagatgttgatgccatgggtctaggaaagtatgggcgtcgagacaattattgtaaacga
caggttgataggtgggctagacaatatattgcttcaactggcaagggtaagcctgcagga
aatcctaagatgtttgagctgatagattggttaaggcaacacattcctcttgaagattct
tcaggagccgtgggaggcttagttcatggagactttcgccttgataatcttgttttccat
cccgtagagaatcgagtgattggcattcttgactgggaattatctactcttggaaaccaa
atgtgtgatgtagcatacagctctatgcattatgttaatgacctcgcagttgacaaatct
caaatttctgaaggtatggaacttactgggattccagaaggaattccatcactagcagaa
tatttggctgagtactgctctttaactcataaaccatggcctgcagctgtgtggaagttt
tatgttgccttttctttgtttcgaggagcatcaatctttgcaggaatatatagtagatgg
atcctgggtaatgcatcggcaggtgagcgcgcccaacattcgggagacaaagctaatgct
cttatagacgctgcatgggcatttattaaccgggattacgtgcttccgaatagtcctcct
tcaagtgcttttgttcaaaaaaatatattggagccatctgaaaatgcaagtaaagatcag
gtattttcaggaacggggagatttgttcccagtgagaaggtaatggaattgagaaacaaa
ctgattaagtttatggaagatcacatataccccatggaaaatgaattctacggactagct
cagtctggttcacgttggactgttcatccagaggaagagaggttaaaggaactggcaaag
aaagcaggactttggaacttatggataccttttgacagtgcagaaagagcgaaaaaactg
atttttggtggaagcaattatcattcctctggtggtacattcaatcagttactgggagaa
ggcctgtcaaaccttgaatacggatacctttgtgagatcatgggccgttctgtttgggcg
ccacaaatattcaattgtggagctcctgacacaggaaatatggaggtattactgagatac
ggaaataaagaacaacagcttgaatggcttattcctttgcttgaggggaaaattcgatca
gggtttgcaatgacagaaccaaaagttgcgtcttctgatgcaactaacattgagtgttct
attaaaagacaaggagattcgtatgtcatcaatgggactaaatggtggacaagtggtgcc
atggatccaaggtgcagacttcttatagttatgggaaagactgacttcaatgcagccaat
cataagcaacaatctatgatcttggttgatattaagactcccggtgtgcatgtaaagaga
ccgctgatggtttttggctttgacgatgcacctcatggacatgcagaagtatcatttgag
aatgtacgtgtcccagcaaaaaatattttattgggagaagggcgtggatttgaaattgcc
cagggtaggttgggccctggaaggttgcatcattgcatgaggctgataggctctgctgag
cgtggaatgcaactgatggctcaaagggctcttagtagaactgtcttcgggaagttgatt
gccgagcaaggttcttttctttcagatttggcaaagtgtcggatagagctggagaaagct
agattattggttttcgaagcagctaaccagcttgatatacttggaaataagagagctcga
gggaccatagcaatggccaaggttgcagccccgaacatggcgctgaaggtgcttgacatg
gcaatgcaagtacatggtgctgcggggttatcttcagacactgttctgtcacatctttgg
gccacggccagaacactgcgtattgcagatggtccagatgaagttcatttgggtactatt
gccaagttagaactgaggaaggctaagctttga
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