| Entry |
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| Name |
(RefSeq) uncharacterized protein LOC115722140
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| KO |
| K12867 | pre-mRNA-splicing factor SYF1 |
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| Organism |
csav Cannabis sativa (hemp)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:csav00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115722140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csav03019]
115722140
03041 Spliceosome [BR:csav03041]
115722140
Messenger RNA biogenesis [BR:csav03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115722140
Spliceosome [BR:csav03041]
Complex B
Other components
Prp19-related factors
115722140
Complex C
115722140
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:complement(57908898..57913024)
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| AA seq |
911 aa
MSISQDLYPSQDDLPYEEELLRNPFSLKLWWRYLIARADSPFQKRFIIYERALKALPGSY
KLWHAYLRERLELVRNLPVTHSHFETLNNTFERALVTMHKMPRIWIMYLQTLTDQKFITR
TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPSHIEDFIEFL
INSGLWQEASERLASVLNDDQFHSIKGKTKHRLWLELCDLLTKHANEVSGLNVDAIIRGG
IRKFTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYAQFEESML
AHKMEVMDLSDDEEEEEDGDEEDEDVRLNLKLSLAEFEKKILSTCWLHDDKDVDLRLARL
DNLMDRRPELANSVLLRQNPHNVEQWHRRVKLFEGNPTKQILTYTEAVRTVDPMKAVGKP
HTLWIAFAKLYETHSDIVNARVIFDKAVQVNYKTVDNLATIWCEWAEMELKHKNPKGALE
LMRRATAEPSVEVKRKVAADGSEPVQMKLHKSLRLWTLYVDLEETFGSLESTREVYERIM
DLRIATPQIIINYAYLLEENKYFEDAFRVYERGVKIFKYPHVKDIWVTYLTKFVKRYGRT
KLERARELFEHAIETTPADAVKPLYLQYAKLEEEYGLAKRAMKVYDQATKAVPNSEKFSM
YDLYINRAAEIFGVPKTREIYEQAIESGLPDKDVKKMCSKYAELEKSLGEIDRARAIFVF
ASQFSDPRSDTDFWQEWNNFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQKDQ
TVDLDEAKEKLKQAGVPEDEMAALERQLAPAANDPIAKDGNRKVGFVSAGVQSQTDEGLK
VTANHEDIELPEENDSDEDNEIVELKQKDVPDAVFGELAHKRRENEEDEAQNKDDESRLG
ALERIKRLKKP |
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| NT seq |
2736 nt +upstreamnt +downstreamnt
atgtccatatctcaagatctttacccttctcaagatgatcttccctacgaagaagaactt
cttcgaaaccccttcagtctcaagctatggtggagatacctcattgctcgtgccgactcg
ccattccaaaaacgcttcatcatctacgagcgagctctcaaagctcttccaggaagctac
aaactctggcacgcttatctcagagaacgcctcgagttggttcgtaacctacccgtcact
cactcccactttgagaccttaaacaataccttcgaacgagctctcgttacaatgcataag
atgcccagaatttggatcatgtacctccagactttgacggaccagaaattcataactcgg
actcgacgaaccttcgatagagcactatgcgctttaccagtcactcagcacgatcgaatt
tgggagccttacctcgttttcgtcagccaaaagggtattccgattgagacttcgcttcgc
gtttatcgaaggtatttaaagtacgaccctagtcatattgaggatttcattgagtttttg
ataaattctggtctttggcaagaggcatctgagaggttagcttctgtgttgaacgatgat
cagtttcattctattaagggaaagactaaacataggctttggttagaattgtgtgatttg
ctgactaaacatgctaatgaggtttctgggttgaatgtggatgcgattataaggggtggg
attaggaagtttactgatgaggttggtcgtttatggacctctctggctgagtattacata
aggagaaatttacatgagaaagctagagatatatttgaggagggtatgactactgtagtt
acggttagagattttagtgttatttttgattcttatgctcaatttgaagagagcatgctg
gctcataaaatggaggttatggatttgagcgatgatgaagaagaggaagaggatggcgat
gaagaggatgaagatgtgaggttgaatttgaagttgtctttggctgaatttgagaagaag
attcttagtacttgttggctacacgatgataaggatgtagatttgaggttagctagattg
gacaatctcatggatagaagacccgagttagcgaatagtgttcttttacggcagaatcca
cataatgtggagcaatggcatcggagggtaaagctgtttgagggtaatcctacaaaacag
atccttacttacactgaggcggtgaggacagttgatcccatgaaagcagtggggaaaccg
catacgctgtggattgcttttgcaaagctgtatgagacccatagtgatattgtgaatgca
agagtgatctttgataaagcagtgcaggtgaactacaagactgtggataatctggctact
atttggtgtgagtgggccgaaatggaattgaagcataaaaatcctaaaggggcattggag
ctgatgagacgtgctacagcagagccatcagtggaggttaaacgtaaagtggctgctgat
ggaagcgaaccagtacaaatgaagctccacaagtctttgagactatggactttgtacgtt
gatttggaggagactttcggctctttggagtccacccgagaagtctacgaaaggataatg
gatctgagaatagccacgccacaaattattattaattacgcatatctattggaggaaaat
aaatactttgaagatgcatttagggtgtatgaaagaggggtgaagatatttaagtatcca
catgtcaaagacatatgggtaacttacctaacgaaatttgtgaagagatatggacggaca
aaactagaacgtgcaagagaactatttgagcacgctattgaaacgacccctgctgatgca
gtgaaacctctgtatctacaatatgccaaactggaggaggaatatggtctggcgaagcga
gctatgaaggtctatgaccaagccactaaggctgttccgaacagtgaaaaatttagtatg
tatgacctatacatcaaccgggctgctgagatctttggtgtcccaaaaactagggaaata
tatgagcaagctatagaatctggtcttccagataaagatgtgaagaaaatgtgttcaaag
tatgcagagcttgagaagagcttgggagaaattgaccgagctcgtgcgatatttgtcttt
gcatcgcaattttcagacccacgatcagatacagatttctggcaagagtggaataacttt
gaagtgcaacatggcaatgaagataccttcagagaaatgcttcgtattaaacgaagtgtt
tctgcaagttacagccagacgcactttattctgccagagtatctgatgcagaaagatcaa
accgtcgacctggatgaggcgaaagagaaattgaaacaggcaggtgtccccgaagatgaa
atggctgctctagagaggcagttagctcctgcagcaaacgatcctatcgctaaagatggt
aataggaaggtgggattcgtgagtgctggagtacaatcacaaaccgatgaagggttgaaa
gtcacagcaaatcacgaagatattgagctgccagaagaaaatgactctgacgaagacaac
gaaatagttgaactcaagcaaaaagatgtacctgatgctgtttttggagagttggctcac
aagagaagagaaaatgaagaggatgaagctcagaacaaagacgatgaaagtcgtttgggt
gcactcgagagaatcaagaggctcaaaaagccttag |
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