KEGG   Cannabis sativa (hemp): 115722171
Entry
115722171         CDS       T08987                                 
Name
(RefSeq) uncharacterized protein LOC115722171
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115722171
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csav03041]
    115722171
Spliceosome [BR:csav03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115722171
 Complex B
    115722171
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11
Other DBs
NCBI-GeneID: 115722171
NCBI-ProteinID: XP_030507164
LinkDB
Position
9:3259361..3267107
AA seq 1165 aa
MSTSHRLKEKYDKSNASSLHNGDEGSAARTRPLSFEEIMLRRKKKSLCEEVIGVVEAETI
SKEDIVKDAPHSFESDGDYRFHKGSSPNAEVHVAEETMKISSRKKEKLTSVDNKSEDNHL
KGKDRRDCELENKLNTKPNNYTSKEAKRNRNDKETHERRELDKQGGRSDKEIHERREHDK
EIHGRREHDKQGGGRNDKDIHERREHDKKGGRNDKEVHERREHEKQGGRNDKEIRERREH
DKQGRRNDKEIHERRERDKQGGRNDKEVHERREHDRQGDRNDKEIHERREHDKQGGRNAK
VIRERREHDKQGGRNDKEIRERREHDKEGGRNDKETHERIEKDKQRSTNDKEIHERREHD
KQGGRDDKQMHGRREHDRHGGRNDQQMHDRREKDKCLTDSTQNEAGKKHSRDSTGKESHS
DLKRGKSERESKRKYQNGDNEKPKDRNVAKKLDTGKDYDTDISGKSKGKESSKSHHEDTK
MRRGRSRSRDREDRNKRSRSASLGAHKRASHNRVANKEDTSHLSKDRSEKQLYVDKSRLS
SNGLTSHHRRHDESTSGLGGYSPRKRLSETAEKTPPPIHSSEKKSAKWDLPPVGAENMLS
GLAPTNFQSSNIAVPASVQELASAAAIASIPRELPYGFFATSLSNKRFATIDSIQLTQAT
RPMRRLYVENIPSSTTEKALVDWLNDLLLSSAANHIQGTQPCLSCIINKDKGQALVEFLT
PEDASAALAFDGRSISGSILKIRRPKDFVEVATGDQEKSMAAVDTITDVVKDSPNKIFIG
GISKVLSSKMLMEIVSVFGSLKAYYFEANDNLDESCAFLEYVDRSVTLKACAGLNGMKLG
GKVLTVVQALHAGASMENTENSSLYEIPEFAKPLLKEPTQVIKLKNVFNVEDFSLLSEPL
IEEVIEDVRLECARFGSVKSVNVIRQGSSQTTGTEASELYSNEQAGGVEQKSVCEDKDTE
AENLFEHVDDKLSRIDEVEFESDVKEHKEDGLKEHKEDRVKEHKEEGVTDDNNYEDNDIG
TDDNKPDNILHEELPQTVQPQSDVPVEHHDDKIACAVPMDADDSENKPNPKDGSNMEDAD
SSKLGNAAELDGSMKTETDATEKDVVKERDFDLGSIFEVGCVIVEFGRTEAACMAAHCLH
GRMFDDRVVSVEYVTLDHYKARFQK
NT seq 3498 nt   +upstreamnt  +downstreamnt
atgagcacatcacatcgattgaaagaaaagtatgacaaaagcaatgcttcctcgttgcat
aatggagatgaaggaagtgctgctcgaacaaggcctttaagctttgaagagattatgcta
aggaggaagaagaagagcttatgtgaagaagtcataggagttgttgaagctgaaacaatc
tcaaaggaagatattgttaaggatgcacctcatagctttgaatctgatggggattacaga
tttcacaaaggctcttcgcccaatgctgaagtgcatgttgcagaggaaacaatgaagata
agctccagaaagaaagagaagttaacttctgttgataataaatctgaagacaatcatttg
aaagggaaagatagaagagattgtgaattggaaaacaaattgaatacaaagcccaataat
tatacgagcaaggaagctaaaagaaacagaaatgataaagaaacacatgaaaggagagaa
cttgacaagcaaggaggcagaagtgacaaagaaatacatgaaaggagagaacacgacaaa
gaaatacatggaaggagagagcatgacaagcaaggaggaggcagaaatgacaaagatata
catgaaaggagagaacacgacaagaaaggaggcagaaatgacaaagaagtacatgaaagg
agagaacacgaaaagcaaggaggcagaaatgacaaagaaatacgtgaaaggagagaacat
gacaagcaaggacgcagaaatgacaaagaaatacatgaaaggagagaacgcgacaagcaa
ggaggtagaaatgataaagaagtacatgaaaggagagaacatgacagacaaggagaccga
aatgacaaagaaatacatgaaaggagagaacatgacaagcaaggaggcagaaatgccaaa
gtcatacgagaaaggagagaacatgataagcaagggggcagaaatgataaagaaatacgc
gaaaggagagaacatgacaaagaaggtggcagaaatgataaagaaacacatgagaggata
gaaaaagacaagcaacgaagtacaaatgataaagaaatacatgaaaggagggaacatgac
aagcaaggaggcagagatgacaaacaaatgcatggtaggagggaacatgacaggcatgga
ggaagaaatgaccaacaaatgcatgataggagagagaaggacaagtgtttgactgatagc
acacaaaatgaagctggaaagaagcattcgagggactcaacagggaaggagagccattca
gacctaaaaagagggaaatctgaaagagaaagcaagagaaaatatcaaaatggagataat
gagaaacctaaagacagaaatgttgcaaagaaacttgatacagggaaggattatgacaca
gacatttcagggaaaagcaagggaaaagaatcatcaaaatcacatcatgaagatacaaag
atgagaaggggaaggtctagaagcagagatcgtgaggatagaaataaaaggtccagatct
gcctctcttggggctcacaaacgtgcttctcataatagggtggctaataaagaggatact
tcccatctttctaaggatagatctgaaaaacaactttatgttgacaagagtagattatca
agtaatggcttgactagtcaccatcgacggcatgatgaatcaaccagtgggcttggtggt
tattcaccgaggaagaggttgagtgagactgctgagaagactcctccacctattcattca
tctgagaagaaaagtgccaagtgggacctcccacctgtaggagctgaaaacatgttatct
ggtttagctcctactaattttcagtcatcaaacattgctgtgcctgcaagtgtgcaagag
ttggctagtgctgctgctattgcttcaattcctagagagttgccttatggatttttcgct
acttctttatccaataaaagatttgctaccattgactccatccaattaacacaagctaca
cgtcctatgaggagactttatgtagaaaatataccctcttcaacgactgagaaagctttg
gtggactggcttaacgatcttttgctatcttcagctgctaatcatatccaagggacccaa
ccgtgtcttagctgtattattaacaaagacaagggccaagctcttgtggaatttcttaca
cctgaagatgcttcagctgctcttgcttttgatggaaggtccatttctggttctattttg
aaaattagacgacctaaggactttgttgaagtggcaactggcgatcaggagaaatcaatg
gctgctgtcgatacaattacagatgttgtgaaggattcgccaaacaagatcttcattggt
ggaatttcaaaggttctttcatcaaaaatgctcatggagatcgttagcgtgtttggatct
cttaaggcatactattttgaggccaatgacaatctagacgaatcttgtgcatttctagag
tatgtagatcgatcagttactctaaaagcctgtgctggcctgaatggtatgaaattggga
gggaaagtattgactgttgttcaggcacttcatgctggagcatccatggaaaatactgag
aattcgtcgttgtatgagattccagaatttgcaaagccacttctgaaagaacctacgcaa
gttataaagcttaaaaatgtgttcaatgtagaggatttctccttactctcagaaccattg
attgaagaagtgattgaagatgttcgattggagtgtgcaaggtttggcagtgtcaagtct
gttaatgttatcaggcaaggcagtagtcagaccaccggaacagaagcatccgaactttat
agcaatgaacaagcaggcggagttgaacaaaaatcagtgtgtgaggataaagacacagaa
gcagaaaatttgtttgagcatgtggatgataagctgagtcgaattgatgaagtagagttt
gaaagtgatgttaaagaacataaggaagatggattgaaagaacataaggaagacagagtg
aaagaacacaaggaagagggagttacagacgataacaactatgaggacaatgatatcggt
actgatgataataaaccagataacattttacatgaagaactgcctcaaacagttcagcct
cagagtgatgtgccagtggaacatcacgatgacaagattgcttgcgctgtcccgatggat
gctgatgattcagaaaacaaaccgaatcccaaagatggctcaaatatggaagatgctgat
agcagtaaactaggaaatgctgctgaattggatggtagtatgaaaacagaaacagatgct
acagagaaggatgttgtcaaggaacgagattttgatctcggaagcatatttgaggtgggt
tgtgtaattgtggagtttggaagaacagaggctgcttgcatggcagcacattgtttgcat
gggcggatgtttgatgaccgtgttgtgtcggtggagtatgttactcttgatcattacaag
gcaaggtttcaaaagtga

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