KEGG   Cannabis sativa (hemp): 115722267
Entry
115722267         CDS       T08987                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
csav  Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:csav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csav04812]
    115722267
Cytoskeleton proteins [BR:csav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     115722267
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 WDR90_beta-prop_4th eIF2A Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_RIG_1st PROPPIN VPS8_N
Other DBs
NCBI-GeneID: 115722267
NCBI-ProteinID: XP_030507288
UniProt: A0A803Q5N5
LinkDB
Position
9:21312853..21323505
AA seq 796 aa
MTTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKYHEGQVQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETSGVRCLTFNPDGR
TLLCGLHESLKVFSWEPIRCHDGVDVGWSKLSDLNVHEGKLLGCSFNQSCVGVWVVDISR
IEPYAVGIDSRLNGHSESKSSNGGNLSVLSENTSKTSLGRLSQSSDPLAKETKSLGRLSV
SQNSDVKETKVLASTGNVPGTPQRINLSNSPKKILPSSTAVPSATTTKRNSTRVHSTANV
STFNKSEVIPVIVPRTDMAPEPKKELGLAGRTMPFSLQSKATEFRRFPAVREEVDKQTAS
VLADSTTSKGAEFNVAESQRNIFSRVTNSTQGISSEKNAKDDRGIGSGKHEMSSQTEPSA
SCQPDNYETRGNKLNRDTCTVGGLRSGRARSIAVNWEKRDRFSNYEGPTSSISSGAVSTG
NMPPSNSKQRGYPPPVEKESVPATDEDAIADVMEQHTQFVSSMQSRSAKLQGIYRYWERN
DVKGVINAMEKMADHAVVADVVSIMAEKIDIVTLDICTCLLPLLSGLLESNMDRHIGISL
EMLLKLVRIFGSMIYSAISASSSVGVDIEAEQRLERCNTCFVELEKVKRCLPPLSRRGGS
IAKSAQELNLALQEVS
NT seq 2391 nt   +upstreamnt  +downstreamnt
atgactaccaagcgcgcttacaagctccaggagtttgtagcacattctgctgctgtcaac
tgcctcaagattggcagaaaatcctctagggttcttgtcactggtggagaagatcacaag
gttaatctttgggccattggaaaacccaatgccattctgagtttgtctgggcataccagt
ggcattgattcagtcagcttcgactcatcggaggtgttagtagctgcaggggctgcaagt
ggtacaatcaagctttgggacttagaggaggcaaagattgttcgaacacttactggtcac
agatccaattgtatatctgtggacttccatccttttggggagttttttgcgtctggctct
ttggatacaaatctcaagatatgggatatcagaaagaaggggtgcatccacacttacaag
ggccacactagaggagtcaatgccatcagatttaccccagatggccgttgggttgtatct
ggtggagaggacaacaccgtcaagttgtgggatcttactgctgggaagcttttgcatgat
ttcaagtatcacgagggccaggttcagtgcatagattttcacccccatgagtttctgctt
gcaactggttcagcagataggacagttaaattctgggaccttgaaacttttgagctaatt
ggttcaggtggacctgagactagtggagtgaggtgtttgacttttaatcctgatggaagg
accctactgtgtggattgcatgaaagtttgaaggttttctcttgggaaccaattagatgc
catgatggtgtggatgtgggatggtctaaattatcagaccttaatgttcatgaggggaag
cttcttggctgctcgttcaatcagagttgtgttggagtgtgggttgtagacatttcgcgg
atagagccatatgcagttggtattgatagcagattaaatggtcattcagaatctaaatca
tcaaacggtggcaatctgtcagtactaagtgagaacacttcaaagactagtttgggcaga
ttgtcccaaagttcagatcctttagctaaggaaacaaaatcacttggtagattgtcagtt
tcgcaaaattctgatgttaaggaaacaaaagttttggcatccactggaaatgtacctggt
actcctcaaaggataaacttaagcaacagtcccaaaaaaattcttccaagctcaacagct
gttcctagtgcaacaaccacaaagagaaattctacgagggtacactcaacagctaatgtt
tcaactttcaacaaatcggaagtcatccctgttattgtgccaagaacggatatggctcct
gaaccgaagaaagagcttggcttagctggaagaacaatgcctttctctttacagtcaaag
gcaacagagttccgaaggtttcctgctgtcagagaagaagtggataaacagactgcatct
gtacttgctgattccactacttccaagggtgctgaattcaatgttgctgagagccagagg
aatattttctccagagttacaaactcaacccaaggaatatcttctgaaaagaatgccaag
gatgacagaggcattggatcaggaaaacatgaaatgagttcacagacagagccaagtgct
agctgccagcctgacaattatgaaactcgcgggaacaagttgaacagagatacatgtact
gttggaggtctaagatcaggaagggccagatctattgctgtaaattgggagaaaagagat
aggttttcaaattatgaggggcctacttccagtatttcctctggggcggtatccacaggc
aacatgcccccttcgaattccaagcagagaggatatcctccacctgttgaaaaagagtcg
gtgcctgccaccgatgaggatgccattgctgatgttatggaacaacatacccaatttgtg
agctctatgcagtcccgttctgctaagttacagggaatctacagatactgggaaaggaat
gatgtgaagggggtgattaatgcaatggaaaagatggctgatcatgctgttgttgctgat
gtagttagcattatggccgagaaaattgacattgtcacgctggatatttgcacttgtctg
ctgccacttctctctggccttctagagagtaacatggataggcatatagggatctctttg
gagatgctgctcaagctggtcagaatatttggttcgatgatctattctgcaatatcagca
tcttcgtctgttggtgtggatattgaggcagaacaaaggttggaacgttgcaacacttgc
tttgtggagcttgaaaaagttaaacgctgtctacctcccctctccagaagagggggttca
attgcgaaatcagcgcaggagttaaatctagctcttcaggaagtttcttga

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