Cannabis sativa (hemp): 115722311
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Entry
115722311 CDS
T08987
Name
(RefSeq) chloride channel protein CLC-d isoform X1
KO
K05016
chloride channel 7
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csav01009
]
115722311
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115722311
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csav04040
]
115722311
Protein phosphatases and associated proteins [BR:
csav01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115722311
Membrane trafficking [BR:
csav04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
115722311
Ion channels [BR:
csav04040
]
Chloride channels
Chloride channel (CLC)
115722311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
115722311
NCBI-ProteinID:
XP_030507351
LinkDB
All DBs
Position
9:10091733..10099075
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AA seq
823 aa
AA seq
DB search
MLSNHLQNGMETAKLAWSRLPNAEEGQTDALGIAKSDVNSVESLDYEVIENYAYWEEQAQ
RGKLFVGYYVVVKWFFALLIGIGTGLAAVFINISVENFAGWKFALTFAIIQKSYVAGFVV
YILINLALVLSSVYIITQFAPAAAGSGIPEIKGYLNGVDTHGILLFRTLIGKIFGSIGSV
GGGLALGKEGPLVHTGACIASLLGQGGSTKYHVSSRWLQVFKSDRDRRDLVTCGCAAGVA
AAFRAPVGGVLFALEEVTSWWRSPLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGF
IIWDTSELGSLLSSDTYITVSVQLVLILTCLIFSGQDDYYIRELLPMAVIGVIGGLLGAL
FNQLTFYIAGWRRNYLHKKGNRVKIYEACLVSVITSLISFGLPLLRKCSACPESDSDNGI
ECPRPPGMYGNYVNFYCSKDKEYNDLATLFFNTQDDAIRNLFSAKTIHEFSAQSLLTFLV
MFYSLAVITYGTAVPAGQFVPGIMIGSTYGRLVGMFVVNFYAKLNIEEGTYALLGAAAFL
GGSMRMTVSLCVIMVEITNNLKLLVPIMLVLLISKAVGDAFNEGFYEEQARLRNIPLLES
RPKYQMRKMTAKEACGRGVVSFPRVVKVADVVSILHSNKHNGFPVIDHTRNGETLVIGLM
LRTHLLVLLQSKADFQHSPLPSDSRGSRFIRHSLNEFVKPASSKGISIDDVHLSSDDLEM
YIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHIFVVPRPSRVIGLITRKDLLIEENV
DSATLELQSTSVRPQHRDRSSAVRNEEAERPLLNGLLVQHMSD
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgaatcatttgcagaatgggatggagacagccaagctggcgtggtctagactt
ccgaacgcggaggaagggcaaaccgacgctcttggcatcgcaaagagcgatgtgaacagt
gtcgagagccttgactatgaagttatcgagaattacgcttactgggaagagcaggctcaa
agaggaaaactttttgtgggatattatgtggtagtgaaatggttctttgcactgcttatt
ggcatcggtactggactagccgctgttttcatcaacatttccgttgagaactttgcaggc
tggaagtttgctctgacatttgctataatacaaaaatcatatgtagctggatttgtggtg
tacatattaatcaacttggctctagtattgtcctctgtatatatcattacacagtttgca
ccagcagctgctggatctggtattccagaaatcaagggttatctgaatggggttgatact
cacggtatcctgcttttcagaaccttaattggaaagatatttggaagtattgggtcagtt
ggaggtggtctagctcttgggaaagaaggtcctcttgttcatacgggtgcttgtattgct
tctttgcttggacaaggtggatctacaaaatatcatgtaagttccaggtggctacaagta
tttaaaagcgatcgggatcgcagagatcttgtaacttgtgggtgtgcagcaggagttgct
gctgcttttagagctcctgttggtggtgtattatttgcattggaagaagtaacatcatgg
tggaggagtccacttatgtggcgtgtcttcttcacttctgccattgtagctgttgtggtg
cgtactgcaatggggtggtgtaaaagtggaaaatgtggacattttggttcaggtggcttc
ataatatgggacacttccgagttaggttctttactctcttcagatacttacattactgtg
tctgttcagcttgttctaattttaacttgccttattttcagtggccaagacgactactat
attagggagctattgccaatggcagttattggtgtgattggagggttattaggagctttg
tttaatcagttaacattttacattgctggctggcgtcgaaattatttgcacaagaaaggg
aacagagtcaagatatatgaagcctgccttgtatctgtaataacttctcttatttccttt
ggtttgccacttttaagaaaatgcagtgcgtgccctgagtcggattctgataatggaatt
gagtgcccaaggcctccaggaatgtatgggaactatgtaaacttctactgcagtaaggac
aaggagtacaatgatctggcaactcttttctttaatactcaggatgatgccattaggaat
ttgttcagtgcaaaaacaattcacgagttcagtgctcaaagtctattgacctttctggtt
atgttttatagtttagcagttataacatacggcactgctgttccagctggtcaattcgta
cctgggattatgattggttcaacatatggacgtcttgttggcatgtttgtagttaacttt
tatgcgaagttgaacattgaagaggggacatacgctcttcttggagctgctgcttttctt
gggggatcaatgcggatgacagtgtctttatgcgtcattatggttgaaatcacaaataac
ttgaaacttctagttcctatcatgcttgttcttctaatttcaaaggctgttggtgatgct
tttaatgaaggtttctatgaagaacaggcacgattaaggaatattccattactagaatcg
agacctaaataccagatgcggaaaatgacagcaaaggaagcctgtggaagaggggtggtc
tccttccctcgagttgttaaggttgcagatgtagtttctattttacatagcaacaaacac
aatggcttcccagtgattgaccataccagaaatggagaaacacttgtcattggactcatg
cttcgaactcacttgttggtacttctacagtctaaggctgattttcagcatagtcctttg
cctagtgattcaagaggatctaggtttatcaggcattctctcaacgaatttgtgaaacct
gcttctagcaaaggaatatctatagatgatgtgcatcttagttcagatgacttggaaatg
tacatagatcttgccccttttttgaacccctctccatacattgtccctgaggatatgtca
ttgacgaaggtatataatcttttccgtcagctaggtttgagacatatatttgttgttcct
cgtccatctcgtgtaattggtttgattaccagaaaagacctattgattgaggaaaatgta
gattcagccaccttggagctccaatcgactagtgtaagacctcagcatcgcgatagaagt
tcagccgtaaggaatgaagaagcggagcgcccacttctcaacggtcttctggtccaacat
atgtcagactga
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