Cannabis sativa (hemp): 115722312
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Entry
115722312 CDS
T08987
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00061
Fatty acid biosynthesis
csav00071
Fatty acid degradation
csav01100
Metabolic pathways
csav01212
Fatty acid metabolism
csav04146
Peroxisome
Module
csav_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115722312
00071 Fatty acid degradation
115722312
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115722312
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csav01004
]
115722312
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csav04147
]
115722312
Enzymes [BR:
csav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115722312
Lipid biosynthesis proteins [BR:
csav01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115722312
Exosome [BR:
csav04147
]
Exosomal proteins
Exosomal proteins of breast milk
115722312
Exosomal proteins of breast cancer cells
115722312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115722312
NCBI-ProteinID:
XP_030507355
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All DBs
Position
9:10078863..10087808
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AA seq
695 aa
AA seq
DB search
MDSMAPQRRAKAITDHLIPSGESSSILQLNATSGEFVSEQGYSVVLPEKLQTGKWNVYRS
ARSPLKLVSRFQDHPEIGTLHDNFVHAIDTFRDYKYLGTRIRVDGTVGEYKWMTYGEVGT
ARTAIGSGLVYHGISKGSSIGLYFINRPEWLIVDHACSAYSYISVPLYDTLGPDAVKYIV
NHAAVQAIFCVPQTLNSILSFLSDIPSVRLVVVVGGIDDQIPSLPSSTGVQVLSYSKLLS
QGRTNPQPFCPPKPDDVATICYTSGTTGTPKGAVLTHENLIANVAGASIGVKFYPSDVYI
SYLPLAHIYERVNQVMTAYFGVAVGFYQGDNMKLMDDMAALRPTIFCSVPRLYNRIYAGI
TNAVKSSGTLKQKLFNAAYNAKKQALLNGKTPSPMWDRLVFNKIKDKLGGRVRFMVSGAS
PLSPDVMDFLKICFGGRVAEGYGMTETSCVISSMDEGDSLSGHVGSPNPACEIKLVDVPE
MNYTTADEPYPRGEICVRGPIIFRGYHKDEEQTREVIDEDGWLHTGDIGLWFSGGRLKII
DRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVHGDSLNSSLVAVVSVDPDVLQEWAA
SEGIKFENIQQLCNDPRAKAAVLADMDSLGREAQLRGFEFAKAVTLVPEPFTLENGLLTP
TFKVKRPQAKEYFAKAISDMYAELATSDPSPQSKL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggattcgatggcgcctcagcgacgtgcaaaagcaattaccgatcatttaattccttcc
ggagagtcttcctccattctccagcttaacgctacctccggcgagtttgtttccgaacaa
ggctacagtgttgttcttccagaaaaattgcaaacaggaaagtggaatgtgtacagatcg
gctcgttcacctttgaagcttgtcagtagatttcaagatcatcctgaaattggtacacta
catgacaattttgtgcacgcaattgatacttttcgagattacaagtatctgggaacacgg
attcgggttgatggaacagttggagagtacaaatggatgacatatggagaagtaggcact
gctcggactgcaattggttctggcctagtatatcatgggatttcaaaggggtcaagcatc
gggttgtattttatcaatagaccggagtggcttattgttgatcatgcatgctccgcatat
tcttacatatcagttcctttatatgatactcttgggcctgatgctgtcaagtatatagta
aatcatgctgctgttcaagctatattttgtgtgcctcaaacattgaatagtatattgagc
ttcttgtcagatattccatctgtgcgactagttgtggttgttggaggaatagatgatcaa
attccatcactcccctcatcaaccggggttcaggttttatcatattcaaagttgcttagt
caggggcgcactaaccctcagcctttttgtcccccaaaacctgatgatgtagcaaccatt
tgctacactagtggcacaactgggaccccaaagggagctgtattaactcatgagaatctg
attgcgaatgttgctggtgcaagtattggtgtcaaattttacccctcagatgtctacatt
tcatatcttcctttggcacacatctatgagcgcgtcaaccaggttatgacagcatatttt
ggagttgctgttggattctatcagggggacaacatgaaattaatggatgatatggctgct
ctgcgacctacaatcttttgcagtgttcctaggctatataatagaatatatgcaggcata
acaaatgctgtaaagtcatctggcacactgaagcaaaagctgttcaatgctgcctataat
gcaaagaagcaagctttattgaatggaaaaactccatctcctatgtgggacagattggta
ttcaataagataaaagataagcttggaggacgagttcgtttcatggtatcgggtgcctct
cctttgtctcctgatgtcatggacttcctgaaaatctgctttggtggtcgtgtagctgaa
gggtatggaatgactgaaacttcttgtgttataagttctatggatgagggtgacagtctg
tctggtcatgttggttctcctaatccagcttgtgaaataaaacttgttgatgttccagaa
atgaattacacaactgcggatgagccatatcctcgaggtgaaatctgtgtcaggggtcca
attattttccgtggctatcacaaagatgaagagcagacgagagaagttattgatgaagat
gggtggcttcatactggagacattggattgtggttttcaggaggtcgtctaaaaattatt
gataggaaaaagaacattttcaagctggcacagggagagtatattgctccagaaaaaatt
gagaacgtatatgcaaagtgcaaattcgttgcccaatgctttgtgcatggtgacagctta
aattcatctctagtagcagttgtctccgtagacccagatgtattacaagaatgggcagct
tcagaaggcattaagtttgaaaacatacagcagctatgcaatgatccaagagcaaaggct
gccgtcttggctgatatggattctcttggaagagaagctcagctaagaggttttgagttc
gcaaaagctgtgacacttgtgcccgaaccatttacattggagaatggtctgctcactcca
acattcaaggtcaagagacctcaagcaaaggaatatttcgcaaaagctatttcggacatg
tacgctgagctcgcaacttctgatccatctcctcagagcaagttgtga
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