Cannabis sativa (hemp): 115722330
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Entry
115722330 CDS
T08987
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115722330
Enzymes [BR:
csav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115722330
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
Pre-60S particles
Helicases
115722330
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
115722330
NCBI-ProteinID:
XP_030507381
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All DBs
Position
9:complement(2723217..2733940)
Genome browser
AA seq
858 aa
AA seq
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MDSLSLSNGALMKRAKRKRNQKHDAELEQFDSLPWSSSLSGDDPFSFVVGSNELEGGFLS
LEEINEAEYGLEIPKPEGNIKKEKKVKPSKQSIKRKLSQNGGSDGNEVETVDEVSMEKGE
NVLAEKKKKKKKLKMKKKKTKEAQKVEDVDSNAGDVAESEVNETEKDENVEPEQGSEKTK
KKKTKKKKMKKKNVKETQENDESMPVSNVDDDAEAEVVDEADYYSWNELRLHPLIMKSIY
RLGFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIFQRLLEEQEKAANVLEE
RNDEGETITRKGFLRALIITPTRELALQVTDHLKAIGKDTNMRVVPIVGGMSSEKQARLL
KWRPEIVVGTPGRLWELMSXGDKHLVELHSLSFFVLDEADRMIENGHFHELXSIIDMLPM
TSGSAEVNPQNTQSCVTVSSFQRKKRQTFVFSATIALSADFRKKLKRGSAKSKESMSEGF
SSIENLSERAGMRDNVAVIDLTNASIMANKLEESFIECKEEDKDAFLYYILSVHGQGRTI
VFCTSVAALRHLSSILRILGIDVWTLHAQMQQRARLKAIDRFRANEHGILLATDVAARGI
DITGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALISPKETSKFASLWKSFSKESF
QRFPLENSYMPQVMKRLSLARQIDKILRKGSKEKVQKSWVERNAEAIDLVVDSDESEEER
VNNSKQKKVTSANLNKLQQELNDLLSRPLQPKTFSHRYLAGAGVSPLLQHQFQELAKQKL
SVVKTTGGQNKRRKMVVIGQNCVEPLQALRNAGQEVHMDVKGMAQKRKTTEELRKKRKDE
KKRLRDQRRKQKKKMKGL
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggattctctatctctatccaatggagcattaatgaagagagcgaagagaaaacggaat
cagaaacacgacgctgaactcgagcaattcgactccctcccatggagctcatcgttatct
ggcgatgaccctttctcttttgtcgttggctccaatgaactcgaaggaggttttctttcg
cttgaagagattaatgaagccgaatatggtttggagatccctaaacctgagggaaatatt
aaaaaagaaaaaaaggttaagccaagtaaacaatctatcaaacgaaagctcagccagaat
ggtggcagtgatggtaatgaggttgagactgtagatgaagtgagcatggaaaagggagag
aatgtgttggctgaaaagaaaaagaaaaagaagaagttgaagatgaagaaaaagaagaca
aaggaagcacagaaagttgaggatgttgattctaatgctggtgatgtggctgagagtgaa
gttaatgagactgaaaaggatgaaaatgtggaacctgaacagggaagtgagaagactaag
aagaagaagacgaagaagaagaagatgaagaaaaagaatgtgaaagaaactcaggaaaat
gatgaatccatgcctgtaagcaatgtcgatgatgatgctgaagcagaggttgttgatgaa
gctgattattattcatggaatgagttgagactccaccctttgattatgaaatctatatac
agacttggattcaaggaaccgacaccaatacagaaagcttgtattcctgccgctgcccac
caagggaaggatgttattggtgctgcagagaccgggtccggaaagacactggcttttggt
ttgcccatttttcagcgcctcttagaagaacaagagaaggctgcaaatgtactcgaagaa
aggaatgatgaaggagaaactattacccgcaaagggtttttacgggctctcattattact
cctacaagagaacttgcacttcaggtaaccgatcatctaaaggcaattggcaaggatacc
aacatgagagttgttccaattgttggaggaatgtcatccgagaaacaggcaaggcttcta
aaatggaggcctgagattgttgttggaactcctggtagattatgggaactcatgtctngg
ggtgacaagcatcttgtggagttacattcattgtcttttttcgtgctggatgaggctgat
cgaatgatagaaaatggacatttccacgagttgtagtcaataattgacatgcttcctatg
accagtggatctgctgaagtaaatcctcaaaatacacaaagttgtgttacagtttcaagc
ttccagagaaagaaacgacaaacctttgtcttttctgctaccatagctctatctgccgat
ttccgtaagaagctaaagcgtggctccgcaaaatcaaaggaatcaatgtccgagggattc
agttcaatagaaaacctttcagaacgagcagggatgagagacaatgttgctgttattgat
ttgacaaatgcatccataatggcaaataagctcgaggaatcatttatcgaatgcaaggaa
gaagataaggatgcttttttgtattatatattgagtgttcacggacaaggtcgcacaata
gtcttctgtacatcagtggctgctctgcgtcatctatcttctatcttgcgcatacttggt
attgatgtttggacacttcatgcccagatgcagcagcgagctcgattaaaggcaatcgat
cgttttagggcaaatgagcatggtatacttcttgcaactgatgtggcagctagaggcatt
gatattactggtgtgagaactgttgttcactatcagctaccacattcagcggaagtttat
gttcatagaagtgggagaactgctagagcttccgctgatgggtgcagcattgccctgatt
tcaccgaaagaaacttcaaagtttgcttccttgtggaaatccttttctaaggaaagtttc
cagcgttttcctttggagaattcatacatgcctcaggtcatgaaacgtttatctctagca
cgacaaatagacaagattttacggaaaggctctaaggagaaggtacagaaaagctgggtt
gagcgaaatgcagaagcaattgatttagtagtggacagtgacgagagtgaggaggaaaga
gtgaacaattctaagcaaaaaaaagttacatccgcaaatttaaacaagttgcagcaggag
ctaaatgatctcctctcacgaccgctacaaccaaagactttttcacatcgctacttggca
ggggccggtgtttcgcctcttctacaacatcaatttcaagaattagcgaagcagaaacta
agtgttgtcaaaaccacaggaggacaaaacaaaaggaggaaaatggttgttataggtcag
aattgtgtggaaccactccaggctcttcggaatgctggtcaagaggtacacatggatgtt
aaaggaatggcacaaaaacgtaaaactacagaggaactgcggaaaaaaaggaaagatgag
aagaaacgtttgagagatcaaaggagaaaacagaagaagaagatgaaagggttgtaa
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