KEGG   Cannabis sativa (hemp): 115722342
Entry
115722342         CDS       T08987                                 
Name
(RefSeq) ras-related protein RHN1 isoform X1
  KO
K07887  Ras-related protein Rab-5A
Organism
csav  Cannabis sativa (hemp)
Pathway
csav04144  Endocytosis
csav04145  Phagosome
csav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:csav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115722342
   04145 Phagosome
    115722342
   04148 Efferocytosis
    115722342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csav04131]
    115722342
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csav04147]
    115722342
   04031 GTP-binding proteins [BR:csav04031]
    115722342
Membrane trafficking [BR:csav04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    115722342
 Endosome - Lysosome transport
    115722342
Exosome [BR:csav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115722342
  Exosomal proteins of other body fluids (saliva and urine)
   115722342
  Exosomal proteins of colorectal cancer cells
   115722342
  Exosomal proteins of bladder cancer cells
   115722342
GTP-binding proteins [BR:csav04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    115722342
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase Gtr1_RagA TsaE AAA_24 AAA_16 MMR_HSR1 ATPase Imm63
Other DBs
NCBI-GeneID: 115722342
NCBI-ProteinID: XP_030507396
LinkDB
Position
1:complement(45756341..45770512)
AA seq 199 aa
MAKPGNKIIQAKLVLLGDMGTGKTSLVLRFVKGQFFNHQEPTIGAAFFTQILSLTEATVK
FDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISTKDTFVRAKKWVEELQRQGNLSMVMAL
VANKSDLESNREVDAEEGEEFAQENGMFYMETSARTADNINELFYEIAKRLAKACPSKPN
AMSLNNEDQSRRRSFCCLG
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcaaagccaggaaacaagatcatacaagccaaactggttcttcttggggacatggga
actggaaaaaccagtttggtattaagatttgtgaaaggccagttctttaatcatcaagaa
ccaactataggggcagctttttttacccaaatattgtcgttgactgaagccacagtgaaa
tttgatatatgggacacagcaggacaagaacgttatcatagcttagctccaatgtactat
cgtggggcagctgctgcagttgttgtctatgacatttcaactaaggatacgtttgttaga
gccaagaaatgggttgaagaattgcaaagacaagggaacttgagtatggtgatggcattg
gtggcaaacaaatctgatttggagtctaatagagaggttgatgcagaggagggtgaagaa
tttgctcaagaaaatgggatgttttatatggaaacatcagcaagaactgctgataacata
aatgaactgttctatgaaatagcaaagagacttgcaaaagcttgcccctcaaaaccaaat
gccatgagtctaaacaatgaagaccaaagcagaagaagatcattttgttgcttagggtga

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