Cannabis sativa (hemp): 115722373
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Entry
115722373 CDS
T08987
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00450
Selenocompound metabolism
csav00970
Aminoacyl-tRNA biosynthesis
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
115722373
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115722373
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csav01007
]
115722373
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115722373
Enzymes [BR:
csav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
115722373
Amino acid related enzymes [BR:
csav01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115722373
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115722373
Prokaryotic type
Other AARSs
115722373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
C1_1
CoV_peptidase
DUF3952
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
115722373
NCBI-ProteinID:
XP_030507432
LinkDB
All DBs
Position
9:complement(1160212..1166452)
Genome browser
AA seq
802 aa
AA seq
DB search
MGGDASNSETSSGDHKPVKLPIQGRRNILITSALPYVNNVPHLGNIIGCVLSADVFARYC
RLRDYNAIYICGTDEYGTATETKALEEKCSPKQICDKYHAIHRDVYKWFNISFDEFGRTS
TPQQTEVCQAIFKKLLENNWLTENTIQQPYCDACKKFLADRLVEGTCPTPGCDYDSARGD
QCEKCGKLLNPTELKNPRCKVCGTTPHIRDTNHLFLELPLLKDKLEEYINKMSVAGSWSQ
NAIQATNAWLKEGLKQRCITRDLKWGVPVPHENFKEKVFYVWFDAPIGYVSITSCYTSDW
EKWWKNPENVELYQFMGKDNVPFHTVMFPSTLLGTGEEWTMMKTISVTEYLNYESGKFSK
SKGIGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINR
VLSFIAKPAGQGYDSILPDVPHEVSDPLTEKLADKVGKAVEQYVEAMEKVKLKQGLKTAM
SISSEGNAYLQESQFWKLYKEDQPRCSIVMKTSVGLVHILACLLEPFMPSFSREVFKQLN
LEPEQLSLSDEKGDIDRAKKPWNIVPSGHKIGKPEPLFKELKDEEVESFRQRFAGSQADR
VERAEAEAVKVAQQLKKTKITENTGKKQKSAKPATEAEITISRLDIRVGLITKAQKHPDA
DSLYVEEIDVGEGQPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPANMRGIKSQAMVLAAS
NSDHTKVELVDPPKSAQVGERITFPGFEGEPDDVLNPKKKVWETLQVDLHSNTDLVACYK
DIPLTTSAGICTVSSISEGSIR
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcgacgcctcaaactccgaaacgagctcaggcgatcacaagcccgtcaaacta
ccgatccaaggacgccgaaacattctcatcaccagtgctttaccttacgtcaacaacgtt
cctcacctcggcaatatcattggctgtgtgcttagtgccgatgtttttgctcggtactgt
cgtttgagagattacaatgctatttatatctgtggaactgatgagtatggtactgctact
gagactaaagctttggaagagaaatgtagccccaaacagatttgtgataagtatcatgct
attcatagagatgtctataagtggtttaatataagctttgatgagtttggacgaacatcg
acccctcagcagactgaggtttgccaagcaatcttcaagaaactgttggagaacaattgg
ttgactgagaacacaatacagcagccttactgtgacgcttgcaaaaagttcttggctgac
cgacttgtggagggtacctgcccaactccagggtgtgattatgattctgctcgaggagat
caatgtgagaagtgtgggaagcttttgaatcctacagaactgaaaaatcctagatgcaag
gtttgtgggacaactcctcacattcgtgatacgaaccatctatttcttgaactcccgttg
ctgaaagataaacttgaggaatatattaataaaatgtctgtggctgggtcttggagccaa
aacgccatccaagcaacaaatgcttggcttaaagaagggcttaaacagagatgcattact
agggatctgaagtggggggttccagttccccacgaaaacttcaaagagaaggtcttttat
gtctggtttgatgcacctattggatatgtctcaattacttcatgctatacatccgattgg
gagaaatggtggaagaatcctgaaaatgttgaattatatcagttcatgggcaaggataat
gtgccattccacacagtgatgtttccttctactcttcttggaactggtgaagaatggact
atgatgaaaacaattagtgtaactgaatacttgaattatgaatcagggaagttttctaag
agtaaaggcataggagttttcggtaatgatgcaaaagatacaaatattcctgtggaagtg
tggagatattacttgcttactaataggcctgaggtttcagacacattatttacatgggca
gatttgcaagcaaaactgaatagcgaattgctgaataatttgggcaactttataaatcgg
gtcttgagttttattgctaaacctgcaggtcaaggatatgactccattttacccgatgtt
ccgcatgaagtatctgatcctttgactgagaaattagcagataaagttggtaaagctgtg
gaacaatatgttgaagcaatggagaaggtcaaactaaagcaaggtctaaagactgcaatg
agtatttcgagtgagggaaatgcgtatctgcaagaaagtcaattctggaagttatacaag
gaggatcaacctcgctgctctattgttatgaaaacttcagtggggctagtacatattctc
gcatgtctcttagaaccttttatgccgtctttctctcgggaggtattcaagcagctgaat
ttagaacccgaacaactttcactttctgatgaaaaaggagacattgatagggcaaaaaag
ccttggaatattgtaccttctggccacaaaattgggaaacccgagccattgtttaaggaa
ttgaaagatgaagaagtagaatctttcaggcagaggtttgccggaagtcaagctgataga
gttgagagggcagaagctgaggcggttaaggtagcccaacaattgaagaagaccaaaatt
acagagaataccggaaagaagcaaaagtcagcaaaacctgcaaccgaagcagaaattact
atttccagactcgatattcgtgttggtctgattactaaagctcaaaagcacccggatgct
gattctctatatgttgaagagattgatgttggcgaaggacagcccagaactgttgttagc
ggacttgtgaaatttatacctctagaggaaatgcagaatcggaaggtctgcgttctttgc
aacttgaagcctgcaaacatgcgtggtattaagtcacaagcaatggttcttgctgcttcc
aacagcgatcacaccaaggtggaattagttgatcctccgaaatctgctcaagtcggagag
agaattacattcccgggattcgaaggggagcctgatgatgtgttgaacccaaagaagaaa
gtatgggaaacattgcaagtggacttgcattcaaacacagatctagttgcttgttacaaa
gatatcccgttaaccacatcggccggtatctgcactgtatcaagcatttccgaaggatca
attaggtaa
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