Cannabis sativa (hemp): 115722551
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Entry
115722551 CDS
T08987
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115722551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115722551
03016 Transfer RNA biogenesis [BR:
csav03016
]
115722551
Enzymes [BR:
csav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
115722551
Messenger RNA biogenesis [BR:
csav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
115722551
Transfer RNA biogenesis [BR:
csav03016
]
Prokaryotic type
tRNA degradation factors
115722551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH_2
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
115722551
NCBI-ProteinID:
XP_030507654
LinkDB
All DBs
Position
9:complement(61408154..61416588)
Genome browser
AA seq
918 aa
AA seq
DB search
MQAPNPTTLTYTHKPHLHLQPLPFHFPLSPISIPCRRLPNSTLRLKSHSFFSLLLSQNNN
TPSRFACRALPEPFSIKIPVGDRHILVETGHIGRQASASVTATDGETIVYTSVCLADTPS
EPSDFFPLSVFYQERFSAAGRTSGGFFKREGRTKDHEVLICRLIDRPLRPTMLKGFYHET
QILSWVLSYDGLHSPDALAITAAGIAVALSEVPNAKTIAGVRIGLVGDKFIINPTTKEME
DSKLDLLLAGTDDAILMIEGYCDFLPEEKLLEAVQIGQDAVRGICNEVESLVKKCGKPKM
FDAIKLPPPELYKHVEDIIGNELVQVLQIRSKIPRKKALTLLEDKVIDILSEKGYISSDT
TPVVNETISDLLEDEDEDEEVVVDGEVDEGDVHIKPTSRKTTPLLFSEVDVKLVFKEVTS
KYLRRCIVENGRRSDGRTLEEIRPINSRCGLLPRAHGSALFTRGETQSLAVATLGDRQMA
QRIDNLVGVDDWKRFYLQYTFPPSCVGEVGRIGGPSRREIGHGMLAERALEPVLPSEDDF
PYTVRVESTITESNGSSSMASVCGGCLALQDAGVPIKSHIAGIAMGMVLDTKEFGGDGSP
IILSDITGSEDASGDMDFKVAGNEDGVTAFQMDIKVAGITLPIMRKALLQAKDGRKHILA
EMLKCSPPPSRALSKHAPLIHVMKVRSEKIHVIIGSGGKKIKSIIEETGVDGIDTEEDGT
VKITARDLLSLEKATAIISNLTMVPSVGDIYRDCEIKLITNYGAFVEIAPGREGLCHVSE
LSSNYIAKPEDAFKVGDRVDVKLIEVNEKGQLRLSRRALLPDTENSSDSKDSAKENVGDQ
KTEQSKDNKASTTKGRSSSKSSLSENSPQKKFIRKLVAPNKDNSETNKEKEKKSGSKPLS
SISSKDGNSLVNGEANIG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaccaaaccctactacccttacttacactcacaaacctcaccttcatcttcaa
cctctccctttccacttccctctctccccaatttcaattccatgtcgccgtctccccaat
tccactctccgtctcaagtctcactctttcttctctctccttctctctcaaaacaataac
actccctctcgcttcgcctgcagagctctacccgaaccattttccatcaaaatccccgtc
ggcgatagacatattttggttgagactggacatattggtagacaagctagcgcttctgtt
acagccactgatggtgaaactattgtctacacctctgtttgtttggctgatactccaagt
gaaccttcagacttttttcctctttctgtattttatcaagagcgtttttcagcagcaggt
cgaactagtggagggtttttcaaaagagaaggaaggacaaaagatcacgaggttctgatc
tgtagattgattgataggcctttgcgtccgacaatgctgaaaggcttctaccatgaaact
cagatactttcttgggttctgagttatgatggtttgcactctccagatgctttggcaatc
acagctgcaggaatagcagtcgctttatcggaagtaccaaatgcaaagactattgctgga
gttcgaattggccttgttggagataagtttatcatcaatccaacaacaaaggagatggag
gactccaagttggacttgttgttagcaggcacagatgatgcaatattaatgatagagggt
tactgtgattttcttcccgaggaaaagttactggaagctgtacaaattgggcaggatgct
gtacgaggaatctgcaacgaggtggagtctttggttaagaagtgtgggaaaccaaaaatg
tttgatgcaatcaaattgcctcctcctgagctctataagcatgttgaagatattatcggc
aatgagttagtgcaggtcttgcagattaggagcaaaatacctagaaaaaaagccctaact
ttgcttgaagataaagttatagatatactgagcgaaaaagggtacattagctctgataca
acacctgtagttaatgaaacaatatctgatttgcttgaggatgaagatgaggatgaggaa
gtggttgtagatggtgaagtggacgaaggggatgttcatataaagcctacttcacgaaaa
actactccattgctgttctcagaagtagatgtgaagctagtatttaaagaagttacatcc
aagtatctgcgtagatgcattgttgagaatggaagaagaagtgatggccgaactctagaa
gaaatacgcccaataaattcaagatgtggcctacttccaagggcacatgggagtgctctt
tttacacgtggtgaaactcagtccttagccgtggctacacttggcgatcgtcaaatggca
cagagaatagacaaccttgttggtgtagatgactggaagaggttctatctccagtacacg
tttcctccttcttgtgttggggaagttgggcggattggtggtcctagtagacgagaaatt
ggtcatggaatgcttgcagagagagctcttgaaccagtattgccttctgaagatgatttt
ccttatactgtacgagttgagagtaccatcaccgagagcaatggctcctcaagcatggca
tcagtttgcggtggttgcttagcgttgcaggatgctggggttccaattaaatcccacata
gctggcatagcaatgggtatggttctggatactaaggaatttgggggcgatggtagtccg
attattctatctgacataactggatccgaagatgcctccggagatatggactttaaggtc
gcaggaaatgaagatggtgtaactgcatttcagatggacataaaggtggctggaattact
ttacccattatgagaaaggcacttctacaagcaaaggatggccggaagcatatccttgct
gaaatgttgaagtgctcacctcctccatccagagcgctttcaaagcatgccccattgatt
catgtcatgaaggtcagatctgagaagattcatgtaatcattggtagtggcgggaagaag
ataaagagcattatagaagagacaggagtagatggtattgacacagaagaggatgggact
gtgaaaatcactgcaagggatttgttaagtttggaaaaagctacagccattataagcaat
ttgacaatggttccaagtgtaggcgatatttatcgggactgtgagatcaagttaataaca
aattatggagcttttgttgagatagcacctggacgagagggactttgccatgttagtgag
ttgagttcaaattatatagcaaagccagaagacgcttttaaagtcggagaccgtgttgat
gttaaacttattgaggtaaatgaaaagggccaacttcggcttagtcgccgagctctactt
cccgacacagaaaattccagtgactcaaaagatagtgcaaaggaaaatgtaggagatcaa
aagaccgaacagtccaaggataataaggctagcacaacaaaaggaaggagttccagcaaa
agtagcttatcagaaaattctccacagaagaagtttattcggaaattagttgcccctaac
aaagataactcagaaacaaacaaagagaaggagaaaaagagtggtagtaaaccacttagt
agcatttcgagtaaggatggaaatagtttagtcaatggagaggcaaacattggataa
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