Cannabis sativa (hemp): 115722750
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Entry
115722750 CDS
T08987
Name
(RefSeq) pre-mRNA-splicing factor SLU7 isoform X1
KO
K12819
pre-mRNA-processing factor SLU7
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115722750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csav03041
]
115722750
Spliceosome [BR:
csav03041
]
Complex C
Other components
Step II factors
115722750
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
115722750
NCBI-ProteinID:
XP_030507908
LinkDB
All DBs
Position
9:complement(329159..333238)
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AA seq
535 aa
AA seq
DB search
MATASVAFKSREDHRKKLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYINSQRP
TLKHQKKWKSDPNYTKSWYDRGAKIFQAEKYRKGACENCGAMTHEAKFCVERPRIKGAKW
TNMSIAPDEKIETFELDYDGKRDRWNGYDASAYARVIEKYEARDEARRKYLKEQQLKKLE
EKNNKSDEEGASSDDEFEDGLKVDEAKIDESKQMDFAKVEKRRRTTGGGSTGTVRNLRIR
EDVAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNEKFYGGDNRYRTSGQALEFKQLNLH
AWEAFEKGQDIHMQAAPSQAELLYKNYKAIKEKLKSQMKNTIMEKYGNAASEEELPRELL
LGQSEKEVEYDRTGRIVKGMEAFVPRSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQTV
KNSYCTGSAGIEAAEAVADLMKANIDRKAASEETTAPTDEKNLATWGSDVPNDLILNQKK
LAEALKKEDERKKEEKDERKRKYNVSWNDEVTGEEMEAYRMKKVHHDDPMKDFLH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcttcagttgcattcaaatcaagggaggatcataggaagaaacttgaattg
gaggaagctcgtaaagctggacttgcaccagcagaggttgatgaagatgggaaagagatt
aatcctcatattcctcagtatatgtcatctgcaccttggtatattaactctcagagaccg
actttaaaacatcagaagaaatggaaatcggatccaaattatactaagtcttggtatgat
agaggagctaagatatttcaagctgagaaatacagaaaaggtgcttgtgagaattgcggg
gctatgacccacgaagcaaagttctgtgtggaaaggccgcgaataaaaggagcaaaatgg
actaacatgtctatagcacccgatgagaagattgagacgttcgagttggattatgatggg
aaacgtgacagatggaatggttatgatgcatcagcctatgctcgtgttattgagaaatat
gaggcaagagatgaagcccggaggaaatatttgaaagaacaacaactgaaaaagttggag
gagaaaaataataagtcagatgaagagggtgcaagcagtgatgatgaatttgaagatggt
ctgaaagttgatgaggcgaaaattgatgagtccaaacaaatggactttgctaaagtggag
aagcgtagacgtacaactggtggtggaagcactggaacggttaggaatttgcgaattcgt
gaggatgtcgctaaatatcttttaaatctcgatgtaaattctgcttattatgatcctaaa
acacggtccatgagagaggatcctcttcctgatgctgacccgaatgagaagttttatgga
ggcgataaccggtatagaacgagtggacaagcgttggagttcaaacaacttaatttacat
gcatgggaagcatttgaaaagggccaggatatccacatgcaagctgctccatctcaagct
gaacttctgtataagaactataaggccattaaggagaagttgaagtcacaaatgaaaaac
accataatggagaagtatggtaatgctgcaagcgaagaagaacttccgagggagcttctc
ttgggacaaagtgagaaagaagtagaatatgatcggacaggaagaatcgtaaaaggcatg
gaagcatttgttcccagaagcaaatacgaagaagatgtttatatcaataaccacaccagt
gtttggggttcttggtggaaagatcaccaatggggctataaatgctgtaaacaaacagta
aagaacagctattgcaccggctcagctggaatcgaggctgctgaagcagtggcagacttg
atgaaagccaacattgatcggaaagcggcttctgaagagacaactgctccaactgatgag
aaaaatcttgctacatggggaagtgatgtacctaatgacttgatcttaaaccagaaaaaa
cttgctgaagctcttaagaaggaggatgaaagaaagaaggaagagaaagatgaaagaaaa
cgcaagtataatgttagctggaacgacgaggttactggagaggaaatggaggcataccga
atgaagaaggttcatcacgacgatcccatgaaggattttctgcactga
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