Cannabis sativa (hemp): 115722810
Help
Entry
115722810 CDS
T08987
Name
(RefSeq) long chain base biosynthesis protein 1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00600
Sphingolipid metabolism
csav01100
Metabolic pathways
Module
csav_M00094
Ceramide biosynthesis
csav_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115722810
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csav01007
]
115722810
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
115722810
Amino acid related enzymes [BR:
csav01007
]
Aminotransferase (transaminase)
Class II
115722810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
115722810
NCBI-ProteinID:
XP_030508002
LinkDB
All DBs
Position
9:complement(27891500..27895648)
Genome browser
AA seq
483 aa
AA seq
DB search
MESFGLKMVKSTLEWVTLALDAPSAGAVVYGVHIGGHYFVEGLLFVVILFLLSQKSYKPP
KRPLTDKEIDELCEEWVPEPLIPPITEEMKLEPPVLESAAGPHTTVNGKEVVNFASANYL
GLIGHEKLIESCTSALEKYGVGSCGPRGFYGTIDVHLDCEGRIAKFLGTTDSILYSYGLS
TMFSAIPAFAKKGDIIVVDEGVHWGIQNGLYLSRSTIVPFKHNDMESLRNTLEKVTAGNK
RAKKLRRYIVVESVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSFGVLGKSGRGLTEHF
GVPVEKIDIITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAI
DVLEEKPDLITKLKENIAILWKGLSDIPGLSVASNPDSPIVFLTLKKSMGSSKADRDLLQ
EIADSVLKEESILVVTSKKSTLDKCPLPAGIRLFVSAGHSESDLLKASESLKRVAASVLE
RCA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaatcttttggattgaaaatggtaaaaagtactttagaatgggtgacactggctttg
gacgctccttctgctggagctgttgtttacggagttcatatcggcggacattattttgtg
gaaggtcttttgttcgtggtgatccttttcttgttatcccagaaaagttataagcctcct
aaacgaccattgacagataaggaaatagatgagttatgtgaggaatgggttccagaacct
cttattcctcctatcacagaagaaatgaagttggaacccccggtgttggaaagtgctgca
ggaccacatacaactgtcaatggcaaagaagttgtgaactttgcttcggcaaattatctc
ggattaataggacatgagaagttaattgaatcatgtacctctgcattggaaaaatatgga
gtcggttcctgcggtcctcgtgggttttatggaacaattgatgtccatctcgattgtgaa
ggaagaatcgctaagtttttgggtactacagactccattctttattcctatggactttcc
actatgtttagtgctataccagcttttgccaaaaaaggagatataattgttgtagatgag
ggtgttcattggggaatacaaaatggtttatatctgtcgagaagcactattgttcctttc
aagcataatgatatggaatctttaagaaacaccttggagaaggtcactgctggaaataag
cgtgctaaaaaattgcggcgctacattgtggttgaatcagtttaccagaattctgggcaa
atagcccctttagatgagattattagactgaaggagaagtatcgatttcgtgttttattg
gatgaaagcaactcgtttggtgtacttgggaaaagcggaagaggtctgactgaacacttt
ggagttccggttgagaaaatagatataattactgctgcaatgggacatgcattagctaca
gaaggaggattttgcactggaagtgctagggtcattgatcaccagcgattgagtagttct
ggatatgtattttctgcttcattgcccccatatcttgccagtgctgccattaccgccatt
gatgtcctggaggaaaagcctgatctcataacaaaactgaaggaaaatattgcaatactg
tggaaaggattatctgacataccaggactttcggtagcaagcaatcctgattcacctatt
gtttttctaacattgaagaagtcgatgggctcatcaaaagccgacagggatctccttcaa
gaaattgctgacagtgtattgaaggaagagtcaatacttgtggtgacctccaagaaatca
acactagataaatgtccattgcctgctggaatcagattgttcgtctctgctgggcattca
gaatcagatctgcttaaggcatcggaatcattgaaaagagttgcagcctcagtgttggag
cgttgtgcttga
DBGET
integrated database retrieval system
