Cannabis sativa (hemp): 115722937
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Entry
115722937 CDS
T08987
Name
(RefSeq) 15-cis-zeta-carotene isomerase, chloroplastic
KO
K15744
zeta-carotene isomerase [EC:
5.2.1.12
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00906
Carotenoid biosynthesis
csav01100
Metabolic pathways
csav01110
Biosynthesis of secondary metabolites
Module
csav_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
115722937
Enzymes [BR:
csav01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.12 zeta-carotene isomerase
115722937
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Motif
Pfam:
NnrU
ICMT
PEMT
Motif
Other DBs
NCBI-GeneID:
115722937
NCBI-ProteinID:
XP_030508184
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Position
9:18895691..18898755
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AA seq
373 aa
AA seq
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MATFSSSFATLLSSSIPYPLTRHACNFPTIQRIVKFPNSTSTFLPLKLNPLHLTQFSFLT
SSAGFRLAGSSVGNAEPDGEDPPLVGEDSAVFELAKQKLSSWVYFAGILGTVLFVLDVAW
LDNSTGYGKAFIDAVSGLSDSHEVVMLLLIVIFATVHSGLASLRDMGEKIIGERAFRVLF
AGTSLPLAVSTVVYFINHRYDGQQLWQLQDVPGLHQFLWLSSFVSFFFLYPSTFNLLEVA
AVDKPKMHLWETGVMRITRHPQMVGQVIWCIAHTIWIGNSVAVAASVGLIGHHLFGVWNG
DRRLAIRYGDNFEAVKRRTSVVPFAAILDGRQKLPKDYYKEFLRLPYVAITAVTIGAYLA
HPLMQAGSFGLHW
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttctcctcatctttcgctactctcctttcaagttcaatcccctacccactc
acccgccacgcctgcaactttcccaccatccaaagaattgtcaaattccccaattcaact
tcaacctttcttcctctgaaacttaatcctctacacctcactcaattttcttttcttact
tcttccgctggattccgcctcgccggcagctccgttggaaacgccgaacctgatggtgaa
gatccaccgcttgtcggtgaggactctgccgtcttcgaattggccaagcagaaattatct
tcgtgggtttacttcgctgggattctgggaacagttttattcgtgctcgacgttgcctgg
ctcgataactctactggttatggaaaagccttcattgatgccgtttccggactctccgat
agccacgaggtagtaatgctgcttctcattgtaatttttgcaactgtgcacagtggcttg
gctagtttaagagacatgggtgagaaaatcattggagaacgggctttccgtgttttgttt
gctggaacttccttaccattggctgtcagtactgttgtgtactttattaaccacagatat
gatgggcaacaactatggcagcttcaggatgttcctggactccatcagtttctatggctt
tcttcttttgtttccttcttcttcctctacccttccacttttaatctactagaggtagca
gcagttgacaagcccaaaatgcatctttgggaaactggggtaatgagaattacaaggcat
cctcagatggttggacaggttatttggtgcattgctcacacgatctggatagggaactct
gtggcagtggcagcctcagttggcttaattggacaccatctttttggtgtttggaatggt
gacagaagattagccataagatatggggacaattttgaggctgtgaagagaagaacttct
gtcgtaccctttgcagcaattcttgacgggcgacaaaagttgccgaaagattattataag
gaattccttcggttaccttatgtagccatcactgcagtaactataggtgcatatcttgca
caccctctgatgcaggcaggcagttttggacttcattggtag
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