Cannabis sativa (hemp): 115722942
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Entry
115722942 CDS
T08987
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115722942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115722942
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115722942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115722942
NCBI-ProteinID:
XP_030508189
UniProt:
A0A803Q5E6
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Position
9:complement(8068776..8073060)
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AA seq
251 aa
AA seq
DB search
MAGTTPTTYSPSLKTHKKGSKNHDVDWVRPDGRDFHQCRLAFFKTGAVNAAAGSAYAEIG
LTKVIVSVFGPRESKKAMMYSDIGRLNCNVSYTSFATPVRGQGSDNKEFSSMLHKALEGA
IILETFPKTTVDVFALVLESGGSDLPVVISCASVALADAGIMMYDLVTSVSVSCLGKNLV
IDPVWEEESSQDGSLMITCMPKRYEVTQLTITGEWSTPKVNEGMQLCVDACSKLAEIMRT
CLKEAASDYEE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggctggaacaactccgactacatactctccatcactgaagacccacaaaaagggttcc
aaaaaccacgacgtcgattgggttcgacctgatggccgtgattttcaccaatgcaggctt
gcctttttcaagactggggctgtaaatgctgctgcaggatctgcttatgcagagattggg
ttaacaaaagtcattgtgtctgtatttgggccaagagagagtaagaaggcaatgatgtac
agtgatattggaaggttgaactgtaatgtgagctatacaagttttgccactccagtgcgt
ggacaggggtcagacaacaaggagttttcttcaatgcttcataaagctttggaaggtgct
atcatcttggaaaccttccccaaaacaactgtggacgtttttgcactggtgttggaatct
ggtggcagtgatctacctgttgtaatttcatgtgctagtgtagctctggcagatgcaggg
ataatgatgtatgaccttgtaacttcagtttcagtgtcttgccttggaaaaaaccttgta
attgacccagtttgggaagaggaaagctcccaagatggaagcttaatgataacgtgtatg
cctaagcgatacgaggtcactcagctaactatcacaggggaatggtcaaccccaaaagtt
aatgagggaatgcagctatgcgtggatgcttgctcaaagcttgcggagatcatgagaaca
tgtttgaaagaagcagcttccgattatgaagaatag
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