Cannabis sativa (hemp): 115723066
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Entry
115723066 CDS
T08987
Name
(RefSeq) peroxisomal ATPase PEX6 isoform X1
KO
K13339
peroxin-6
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115723066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115723066
Membrane trafficking [BR:
csav04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
115723066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
AAA_22
RuvB_N
Rad17
AAA_lid_3
AAA_33
nSTAND3
AAA_7
DUF815
NPHP3_N
AAA_18
AAA_17
TsaE
RNA_helicase
AAA_28
AAA_14
Parvo_NS1
TIP49
ATPase
IstB_IS21
Mg_chelatase
PEX6_4th
AAA_25
Vps4_C
PhoH
AAA_2
AAA_24
MCM
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
115723066
NCBI-ProteinID:
XP_030508370
LinkDB
All DBs
Position
X:18070846..18077360
Genome browser
AA seq
940 aa
AA seq
DB search
MVGRRKPLVLASTKTLLNSLLTSSQLRDGDQPVHATMAPSSTSLKLPVGILRFPNSTTDV
IDSKLASLDDSALIGVSTSVLKRLSVTSGSTVLVKNVENGKQRIAQTIVLDPPDKHRESS
DGEEDSSQFSREMLIFPSCKFPETDPKCLDREVAYVSPMLVFNLDLHILCLKSLVQGGEE
TIASYFKEKKDDNVFKKGIDNSIIGIQLEPIHFKPRYASHLRVSFVRIPECGILESLKSS
SSVEAEERQEIIDSALHKYFEVDRYLVKGDIFSVRINWDCKSAICVPCRRRFQSKTDDII
YFKVVAMEPSDEPILLVNRTQTALVLGGNAPSALPPDLLIAGYKGFAPLQEETVKLLASV
LTPAICPSTLSSKFRVSVLLHGLAGCGKRTVVRYVASRLGLHVVEYSCHNLMAASERKTS
ATLAQAFNTAQRYSPTILLLRNFDVFRNLASQDGSPSDHVGIISEVASVIREFTEPISED
GDIDSEGKLNGDFNSSNSGTRQMHQVFLIAAADGSEGLPPIIRRCFSHEISMGPLTEEQR
FTMLSQSLQSVTKLIPDINTEDFVKDIVGQTSGFMPRDMHALMADAGASLFSKVNTPIDP
DESKKLSQSPKFQAEPGSESSESTTQVLGKENLMKALDRSKKRNASALGTPKVPNVKWED
VGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNF
LSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRV
VSQMLAEIDGLNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYIGVNSEASYRERVLK
ALTRKFKLHQDISLYTIAKKCPQNFTGADMYALCADAWFNAAKRKALSSDSDSSMDNQAD
SVVVEHEDFMEVLRDLSPSLSMAELKKYELLRDQFEGPSK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaagaagaaagcctttggttctcgcttcaaccaaaactcttctcaattctctc
ctcacttcgtcgcaactccgcgatggagatcagcctgtacatgccactatggccccttcc
agcactagtttgaagttgccggttggaattctccgttttcctaactccactaccgacgtt
attgactcaaaattggcttccctagatgactctgctttgatcggcgtctccacttctgta
ctcaaaagactctctgtaacttcaggctctacggtgcttgtaaagaatgttgagaatggg
aaacaaagaattgcccagaccattgttcttgatcctcctgacaaacacagagaatcttca
gatggtgaagaagattcttctcaattttcacgggaaatgctaatttttccttcttgtaaa
tttccggaaactgaccctaagtgtttggaccgtgaagttgcgtatgtatctcctatgtta
gtattcaatcttgacttgcatatattgtgcttgaagtctcttgttcaaggaggggaagaa
actatagcatcttacttcaaagaaaaaaaggatgacaatgtttttaagaaaggtattgac
aattccatcattggtatacagttggaaccaattcatttcaagccaagatatgcttctcat
ttgagggtttcttttgtgagaatacctgaatgcggtatacttgagtctcttaaaagtagt
tcatctgttgaagctgaagagcgtcaagagataattgattcagcgttacacaaatacttt
gaagtagatagatatttagtcaaaggtgatatttttagtgtccgtattaattgggattgc
aagtcagccatttgtgttccatgcagacgaaggtttcaatctaaaactgatgatattatc
tatttcaaggttgtggctatggaaccctctgatgaacccattttgctagttaatcgcact
caaactgctcttgttcttggagggaacgctccttctgctcttcctccagatttgttgatt
gctggttacaaaggttttgcacctttgcaagaagaaactgtgaaacttttggcttctgta
cttacaccagctatttgtccatccacactttcgtcaaaattcagagtttctgttctattg
catggcttggcagggtgtgggaagagaactgttgttcggtatgttgctagtagattaggc
ctgcatgtagttgaatacagctgtcataatctcatggcggcatctgagagaaagacatca
gctactctagctcaagcttttaacacagctcaaagatactcgcccacaatacttcttctt
cgaaattttgatgttttccgaaatctggcctctcaggatggttcaccaagcgatcatgtt
ggtataatttcagaagttgcttcagttatcagagaattcactgagccaatttctgaagat
ggagatattgattctgaaggaaaactaaatggtgattttaactcaagcaatagtggaacc
agacagatgcatcaggtgtttttaattgcagctgctgatggatctgaaggtctaccacca
attattaggcgttgctttagccatgaaataagcatgggccctttgactgaagaacaaaga
tttacaatgttgtcacaatcgctgcaaagtgtaactaaacttattcctgatataaatacg
gaggattttgttaaggacatagttggacaaacatctggtttcatgcccagagatatgcat
gctttaatggctgatgctggtgctagcttgttttccaaagtcaatactcctatcgatcca
gatgagtccaagaaattaagtcagtctccaaagtttcaagcagaaccaggcagtgagtct
agtgaaagtacaactcaggttctggggaaagaaaacttgatgaaagcactggatcggtca
aagaaaaggaatgcatcggcattgggtactccaaaagtccctaacgtgaaatgggaagat
gttggtgggcttgaggatgtgaagaagtcaattctggatacagttcagttacctctattg
cacaaagatttgttttcatctggcttacgcaagcgctcaggtgttcttctatatggaccg
cctggaacaggaaaaactttattggcaaaagctgttgcaactgagtgctctctgaacttt
ctcagtgtaaaaggacctgaactaatcaatatgtacataggagaatctgagaaaaatgtt
cgcgacatttttcagaaggctagatcagcacgcccatgcgttatcttttttgatgagctt
gattctcttgctccagcacggggtgcatcaggggactctgggggtgttatggacagagtt
gtttctcagatgcttgcagagattgatggcctaaacgattcaacacaggatcttttcata
ataggagctagtaacagaccagatctaatcgacccggcacttctacggcctggcagattt
gataagctactatatattggagtaaattctgaagcatcttatcgagagagggtcctcaaa
gcactgacccgaaagtttaaattgcaccaagacatatcgttatacacaatagcaaagaag
tgcccccaaaacttcactggtgccgacatgtatgcattatgtgcagatgcatggtttaat
gcagcaaagcgcaaggctttgagttctgattctgattcttccatggataatcaagctgat
tctgttgtcgttgaacatgaagattttatggaggtattgagagatctttctccttcactc
tccatggctgaacttaagaaatacgagttacttcgagatcagttcgaagggccctcaaaa
taa
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