Cannabis sativa (hemp): 115723400
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Entry
115723400 CDS
T08987
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115723400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115723400
Enzymes [BR:
csav01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115723400
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
HECT type E3
115723400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
DUF7337
Motif
Other DBs
NCBI-GeneID:
115723400
NCBI-ProteinID:
XP_030508735
LinkDB
All DBs
Position
9:complement(3910317..3920355)
Genome browser
AA seq
1034 aa
AA seq
DB search
MFFSGDPSTRKRVDLGGRSTKERDRQKLLEQARLERNKRYWVRQQNFAATKIQKCFRGRK
VVAAERSKVREQFYGKFGKLCQNVDRNCFGLDSEFLRQLFYFFDARKAGDIETLMETCRI
LQKLVQDSGDIVSLFAGTEYSSKHALVDYRVKQLAYLCIKAIHQNRHHLKSQIFAAPEES
STCTTLLLETVHLLIDPKLPWTCKTVGFLLLKKAFGMFREIILTGKENLDVHICLSKVSS
LEQVLVLLSSHTGQNPCICPNIDARWSFSSQILTVPFLWKLFSGLKEALATRGLCQFYLH
QMAIYVQNHANVLPSDLSKEFPGYACLLGNILETAGVALSQPDCCFEMAVDLAAVTTFLL
EALPSMKSSNRETQDNMQIDDEVVAGDEPVEMALNRGLEKQICNAIDPSFLLQFTNVLFG
GISTVKGSHNDPDDREVAAVGAACSFLHATFNALPLERIMTVLAYRTELVPVLWNFMKRC
HDNQKWMSLSEHFSYLLSGDGPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLEDIR
SLIIILRQALWQLLWVNPTSPSNSGRSVSHNNTIKGNPVEVIQHRVSVVASDLLSQLQDW
NNRREFASPSDFHADGVNEFFISQAVLENTRANDILKQAPFLVPFTSRVKIFASQLAAIR
QKHSSHAVYTRNRFRIRRDHILEDAYNQMSALSEDDLRGPIRVTFVNEFGVEEAGIDGGG
IFKDFMENITRAAFDVQYGLFKETSDHLLYPNPGSGMIHEQHLQFFHFLGVLLAKAMFEG
ILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYKGDISDLELYFVIVNNEY
GEQTEEELLPRGKDSRVTNDNVITFIHLVANHRLNFQIRQQSSHFMRGFQQLIQKDWIDM
FNEHELQLLISGSLASLDVDDLRSNTNYAGGYHSEHYVIEMFWEVLKGFSMENQKKFLKF
VTGCSRGPLLGFKFLEPLFCIQRAAGSATEEALDRLPTSATCMNLLKLPPYRSKEQLESK
LMYAISADAGFDLS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgttcttttcaggcgatccgtcgactcggaagcgagttgatttgggaggccggagcacg
aaggaaagagataggcagaagcttcttgagcaggctaggttagagcggaacaagcgatat
tgggttcggcaacagaactttgctgctactaaaattcagaaatgcttcaggggaagaaag
gtagtggctgctgaacgatctaaggttcgagaacagttctatggaaaatttgggaaactt
tgccaaaatgtggacaggaattgttttggtttggattcagaatttttacgccagttattt
tacttttttgatgctcgaaaagctggagatattgaaacccttatggagacatgccgaata
cttcagaaattggtccaagatagtggggatattgtgagcttatttgctgggacggagtac
tcatccaagcatgctttggtggattacagagtgaagcaacttgcatacttatgtattaag
gctatacatcaaaacagacatcatttaaagagtcaaatttttgccgcacctgaagagtca
agcacatgcacaaccctgttgttagaaacagtgcaccttttgatcgatcccaaacttcca
tggacttgcaagacagttggttttctattgctaaaaaaggcatttggcatgtttagagag
atcattctaacaggaaaggagaacttggacgttcatatttgccttagcaaagtgtcttca
ttggaacaagtgcttgttctcttaagctctcatactggccaaaatccctgtatttgccca
aatattgatgcaagatggagtttctcatcccaaattcttactgttcctttcctctggaag
cttttctctggtttaaaagaggctcttgcgacaagaggtctgtgccaattttaccttcat
cagatggcaatctacgtgcaaaatcatgctaatgtgcttcctagtgatttatcaaaagag
tttcctggttatgcctgcctccttggaaatatattagaaactgcaggagttgcattatct
cagcctgattgctgttttgaaatggctgtagaccttgctgctgttacaacgttcttgttg
gaggctcttccttcaatgaaatcttcaaatagagaaactcaagacaatatgcagattgat
gatgaagttgtggcgggtgatgagcctgtggaaatggctttgaataggggtttggagaaa
caaatttgtaatgctattgatccatcctttcttctacaattcacaaatgttttgtttgga
ggaatttcaactgtcaagggttcgcataatgatccagatgacagagaggttgctgctgtt
ggtgcagcttgttcttttctccatgccactttcaatgcattacctctggaaagaatcatg
actgtgttggcttatagaactgaacttgttccagtactgtggaattttatgaagcggtgt
catgacaaccagaaatggatgtccttgtctgaacatttctcatatcttttgtcgggagat
ggacctggttggctattaccattggctgttttctgtcccgtgtacaagcacatgctcatg
atagttgataacgaggagttctatgaacaagagaagccactctcactggaggatatcaga
agtctgattattatactaagacaggccttgtggcagcttttatgggtgaatcctacaagt
ccttcaaattctgggaggtctgtcagccataataatactattaagggaaacccagtggaa
gtcattcaacacagggttagtgttgtagcctctgatcttctttctcagttgcaagattgg
aacaacagaagggagtttgcatctcctagtgacttccatgctgatggtgtcaatgagttt
tttatttcacaggctgtattagaaaatacccgtgcgaatgacatattgaagcaagctccc
tttcttgttccttttaccagcagagtgaaaatattcgcttcacaattggcagcaattagg
cagaagcatagttctcatgctgtttatacccgaaaccgctttagaataaggagggatcac
attctggaagatgcttataatcagatgagtgctttatctgaggatgaccttcgtggaccg
attcgtgtaacctttgtaaatgagtttggagttgaggaggctggcattgatggtggaggg
attttcaaagattttatggagaacatcactcgagctgcctttgatgtgcagtatgggcta
tttaaggaaacatctgatcacctgctttaccctaatcctggttctggaatgatacatgaa
caacatctccaattttttcattttcttggagttcttctggcaaaggcgatgttcgaaggg
attcttgttgatataccatttgcaacattcttcttaagcaaactaaaacaaaagtacaac
tacttgaatgatttgccttccttggacccagaattgtatcgtcatctcattttcttaaag
cattacaagggggacatatctgatttagaactgtactttgtcattgtaaataatgaatat
ggagagcaaacagaagaagaactgcttccacggggaaaagattcacgtgtcaccaatgac
aatgttattacatttattcatctagttgctaatcatcgattgaattttcagatacgccaa
caaagttctcattttatgagggggtttcagcagcttatacagaaagattggattgatatg
tttaatgagcatgaactgcagcttctgatatcaggttcacttgcaagcttggacgttgat
gatttacgatcgaataccaactatgctggtggctatcatagtgagcattatgtcattgag
atgttctgggaagtcctgaaaggcttctcaatggaaaatcagaagaagtttcttaagttt
gtgactgggtgctctcgaggaccactgcttggattcaaatttcttgagccgctgttttgc
atacagagggcggctgggagtgctactgaagaagctcttgaccgattaccaacatcagct
acttgtatgaatcttctaaagcttccaccttatagaagcaaagagcaactagaaagtaaa
ctgatgtacgcaataagtgctgatgctggttttgatttgagctga
DBGET
integrated database retrieval system
