Cannabis sativa (hemp): 115724100
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Entry
115724100 CDS
T08987
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115724100
03036 Chromosome and associated proteins [BR:
csav03036
]
115724100
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
115724100
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115724100
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
115724100
microRNA pathway
RISC loading complex
115724100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
115724100
NCBI-ProteinID:
XP_030509418
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All DBs
Position
9:52206123..52213409
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AA seq
893 aa
AA seq
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MGSKEQCGVPAIVNQELAVTPPKYSLMSRKGTGRAGRRIPLLANHFNVSLNVPDAVFYHY
SVSITSEDGKEVNLKGIGRKVIDRLHQTYSSEFSGKRFAYDGEKSLYTVGPLPQIKFEFT
VVLEESLAKQENGSPGGRDNPSEKSKRSKRSYHSKTFKVELSYATKVPLRSVALALKGVD
ADNSTQDALRVLDIILRQQAANRGCLMVRQSFFHDDLRNFTDVGGGITGVRGLHASFRPT
QNGLSLNMDVSTTLILRPGSVIEFLIANQGVQNIRQVDWGKAKRMLKNLRIKTRHRHMEF
KIIGLTDKPCRDLFFNMKVKNGDNTNGDETEEISVYDYFMKHCGIELRESAYLPCLIVGR
PKKPNFLPLELCSLVSLQRYTKALSSGQRASLVEKSRQKPQEKMKIVVDAVRNYRYDSDP
LLADCGISIEKQFTQVDGRILDPPKLEFGNDRGFAPSNGRWNFNNKTVLTPISISCWVVV
NFSARCDMSKISRDLISCGRKKGIQIDGPKTLIDEDHLSRRGSPVTRVEKMFELIRDKVP
GPPEFILCLLPERKNSEIYGPWKKRCLCDFGIVTQCIAPFKVNDQYLTNVLLKINTKLGG
INSLLAIEKPSRIPVIKDNPTMILGMDVSHGSPGRSDVPSIAAVVSSRSWPCISRYRASV
KTQSPKMEMIDGLYKPLENGKDGGIIRELLIDFYQTSNAQKPNQIIIFRDGVSESQFNQV
LNIELDQIIKAYQHLGEENLPKFTVIVAQKNHHTKLFQAGGANNNIPPGTIVDNGIVHPR
NYDFYLCSHAGMIGTSRPAHYHVLVDEIDFSPDDLQNLIHSLSYVYQRSTTAISIVAPIC
YAHLAAYQMGQFIKLDDFSDTSSGQRSVSSSGSIPVPDLPKLHDNVKTSMFFC
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgggttctaaggaacaatgtggtgtcccggcaattgtgaatcaagaactggccgtcacc
cctccaaagtattctttaatgagcagaaaaggaactggacgtgcagggcgccggatacct
ttactggcaaatcattttaatgtttcccttaatgtcccagatgcagtattttatcactac
agtgtatctattacttcagaagatggtaaagaagttaatcttaagggaattggaagaaaa
gttattgataggctgcaccaaacttattcttctgaattttctggtaaaaggtttgcatat
gatggagagaaaagtctttacacagttggtcctctgccacaaatcaagtttgagttcact
gttgtcttggaggagtcattagcaaagcaggaaaatgggagtcctggtggcagggataat
cccagtgaaaagagtaaacgctcaaaacgctcttatcactcaaagacttttaaggtagaa
ttaagttatgctaccaaagtacctttgaggtcggttgctcttgctcttaaaggagttgat
gcagataatagcactcaggatgcattgagagtgcttgatatcatccttaggcagcaagca
gctaacaggggatgccttatggtaaggcagtcattttttcacgacgacttgaggaacttc
actgatgttggaggtggaataactggtgttcgagggttacatgctagctttcgcccaact
cagaatggcttgtccctcaatatggatgtgtccacaacgttgattttgagacctggatct
gttattgaatttctgatagctaatcagggtgtacaaaatattcgtcaagttgattggggg
aaggcaaagcgaatgcttaaaaatctgaggattaaaacaagacaccgccacatggagttt
aaaatcataggcttgactgacaagccatgccgtgatctattttttaacatgaaagtgaaa
aatggtgataatacaaatggagacgagactgaagaaatatctgtgtacgactattttatg
aaacactgtggtatagagctacgtgaatctgcttacctgccatgccttattgttggcaga
ccaaaaaaacctaactttctacctcttgagttgtgttcacttgtttcgcttcaacggtat
acaaaagcattatcttctgggcagagggcatcgctggtggaaaaatctcgacaaaagcct
caggaaaagatgaaaattgtcgttgatgcagtaagaaattaccgctatgatagtgaccca
ttgctagctgactgtggcatctctatagagaagcaatttactcaagttgatggtcgcatc
cttgatcccccaaagttggagtttggtaatgatcgtggctttgccccatctaacgggaga
tggaactttaacaataagactgttttgacgccaattagcattagctgttgggttgtggtc
aacttctctgcgcgctgtgatatgagtaaaatttcaagggatcttattagctgtggaagg
aagaaaggaattcaaattgatgggccgaaaacattaattgatgaagatcatctatctcgc
cgaggatcccctgttacaagggttgaaaagatgtttgagctgattagagacaaggttcca
ggcccacctgagtttatcctttgcctcttgccggagagaaaaaattctgagatctatggg
ccatggaagaaaagatgcctatgtgacttcggaattgtcacccagtgtatcgccccattt
aaggtcaacgatcaatatctaaccaatgttcttctgaaaatcaataccaagcttgggggg
attaattctttgttggcaattgaaaaaccttcacgaattcctgtcataaaagataatccc
acaatgattttgggaatggatgtgtcccatgggtctcctgggcgctcagatgtcccttca
atagctgcggtggttagctctcgaagttggccatgtatttcaaggtatagagcatcagta
aaaacacagtcacctaaaatggagatgatcgatggtctatacaagcccttggaaaatgga
aaggatggtggaatcataagggagctgcttattgacttctaccaaacaagtaatgcgcag
aaacctaatcagataattattttcagggatggagtaagtgaatcacaattcaatcaagtc
ttgaacattgagttggatcaaatcataaaggcgtatcaacatctaggggaggaaaacctt
cctaagtttactgtgattgtggcacagaagaatcatcacacaaagttatttcaagctggt
ggtgccaacaataatattccaccaggaactattgtggacaatggaattgtgcacccaagg
aactatgatttctatctgtgctctcatgctgggatgattggaacttctagaccagcacac
taccatgtccttgttgatgagatcgatttctctcctgatgacttacaaaaccttatccac
tccttatcttatgtgtaccaaagaagcacaactgcaatatcaatagttgctccaatatgt
tatgcccatcttgctgcatatcaaatgggccagttcatcaagttggacgatttctccgat
acttcttcaggacagagatcagttagttcttcgggtagtattcctgttccagatctccct
aagttgcatgacaatgttaagacctctatgtttttttgttga
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