KEGG   Cannabis sativa (hemp): 115724490
Entry
115724490         CDS       T08987                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
csav  Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:csav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csav04131]
    115724490
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csav04147]
    115724490
Membrane trafficking [BR:csav04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    115724490
Exosome [BR:csav04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   115724490
  Exosomal proteins of bladder cancer cells
   115724490
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd TPR_COPA_B Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 WD40_RFWD3 NBCH_WD40 Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_At4g14310 Aa-Ago_N
Other DBs
NCBI-GeneID: 115724490
NCBI-ProteinID: XP_030509641
LinkDB
Position
6:69568199..69573805
AA seq 1218 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKSGSPPDDMLR
LSQMNTDLFGGVDVVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTRRTGVQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYVKDRFLRYYEFSTQKDTQVAPIRRPG
STSLNQSPRTLSYSSTENAVLICMDAEGGSYELYSIPKDNISRGDNVQDAKRGVGGSAVF
VARNRFAVLDKSSNQVLVKNLKNEVVKKSVLPIAADAIFYAGTGNLLCRAEDRVVIFDLQ
QRLVLGDLQTPFVKYVVWSNDAENVALLSKHAIIIASKKLVHQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSANTIFCLDRDGKNRAIVIDATEYI
FKLSLLKKKYEHVMTMIKNSQLCGQAMIAYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QTAVASATALDKKDLWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLVTGNTDKLSK
MLKIAEVKNDVMGQFHNALYLGNVRERIKILENVGHLPLAYITASVHGLHDIAERLAEQL
GDNVPSLPEGKVPTLLIPPTPVMCGGDWPLLRVMKGIFDGHLDNFGKGAGVVEEDDEAAD
ADWGEELDMVDVDGLPNDVTAISEDGEAVGENDEEGGWDLEDLELPPEADTPKATNARSS
VFVAPTPGMSVSQIWVQKSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLKSMFLDLQTG
SHSFLRAFSSAPVIPLAVERGWNESASPNVRGPPALVYNFSQLEEKLKLGYKSTTGGRFT
EALRLFISILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRKELRDDPVRQQEL
AAYFTHCNLQLPHLRLALQNAMTICFKAKNLATAANFARRLLETNPPNENQSRTARQVLQ
AAERNMTDASELNYDFRNPFVICGATYIPIYRGQKDVSCPYCTSRFVPSQEGQLCAVCDL
ATVGADASGLLCCPAQIR
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgttgacgaagtttgaaaccaagagtaatcgagtgaagggtctcagcttccatagtaag
aggccatggatccttgcgagtcttcacagtggtgtgatccagctatgggactaccgtatg
ggaactttgattgatcgatttgatgagcatgatgggccagtccgtggtgttcattttcac
aaatctcagccgctctttgtatctggaggggatgactacaaaataaaagtttggaactac
aagctgcataggtgtctttttacacttcttggacaccttgattatattcgtactgtgcag
ttccatcatgaaaatccatggatagtaagtgccagtgatgatcagactattcgcatttgg
aactggcaatcacgcacttgcatttcggtattaactggtcacaatcactatgtcatgtgt
gcttccttccatcctaaagaagaccttgttgtgtcagcatcccttgatcagactgttcgt
gtttgggatattggtgcccttagaaagaaatctggatctcctccagatgacatgctgcga
ttgagtcagatgaatacagatctttttggaggtgttgatgttgttgttaagtatgttttg
gagggtcatgatcgaggtgtcaattgggctgcattccaccctacccttcctctgattgtt
tctggagcagatgatcgtcaagtcaaactgtggcggatgaatgacacaaaagcatgggaa
gtagacacattgagagggcacatgaataatgtttcatgtgtaatgttccatgccaaacaa
gacataattgtctccaattcagaagataaaagcatccgtgtttgggatgtaacaaggcga
actggggttcagacatttcgcagagagcatgatcgcttctggattcttgctgctcatcct
gagatgaatctgttggcagcaggtcatgacagtggcatgattgtctttaagttagagagg
gagcgaccggcttttgcagttagtggtgatagccttttctatgttaaagatcgattcttg
cggtattacgagttttcaactcaaaaggatacacaagttgctccgattagacgccctggt
tccactagtttaaatcaaagccctagaactctcagttacagttctactgaaaacgctgtt
cttatatgcatggatgcagaggggggctcttacgaattgtattccataccaaaagacaac
attagtaggggtgataatgtacaagatgcaaagagaggtgttggaggatcggctgttttt
gtggctcgtaatagattcgctgttcttgacaaaagcagcaaccaagttctggttaagaat
ctgaaaaatgaggttgtaaagaagagtgtccttccaatagctgctgatgctatattctat
gctggaactggtaacttgctgtgtagagcagaggatagagtagttatatttgatctccag
cagaggcttgttcttggtgatcttcaaactccctttgtcaagtatgttgtttggtctaat
gatgccgaaaatgttgcattgcttagcaagcatgctattataattgctagcaagaagctt
gtgcatcaatgtactttgcatgaaacgatccgtgtaaagagtggtgcttgggatgacaac
ggggtatttatttacacaactcttaatcatattaagtattgcctgcccaatggagatagt
ggaatcatcagaacccttgatgttccaatatacataacaaaggtttctgcaaataccata
ttttgcttggatagagatgggaaaaacagagccatagttattgatgcaactgagtatatt
ttcaagctgtccttattgaagaaaaaatatgagcatgttatgaccatgataaagaactca
caactctgcggacaggcgatgattgcttatcttcagcagaaggggttccctgaagttgct
ctccattttgtgaaagatgagaaaactcgtttcaatttggctttggagagtgggaatatt
caaacagctgttgcttcagctactgcacttgataagaaagatctttggtacagattggga
gtcgaggctctgcgtcagggcaatgcaggtattgtggaatatgcctatcagaagacaaag
aactttgagaggttatcattcttgtatcttgtaactggtaacacagacaagctatccaag
atgctgaaaattgccgaggttaaaaatgatgtcatgggtcagttccataatgctttgtat
ttgggtaatgttcgtgaacgtattaaaatcttggagaatgttggccacctgccacttgct
tacattacagcttcagttcatggactccatgacattgctgaacgtttagctgagcaattg
ggagataatgttccatctttgccagaagggaaagtacctacccttctgattccccctact
cctgtcatgtgtggtggtgattggccacttctaagggtaatgaaaggcatctttgatggg
catttggataatttcggcaagggagctggtgtagttgaagaagatgatgaagctgctgat
gctgactggggtgaagagcttgacatggttgatgttgatggcttaccaaatgatgtcact
gcaatatctgaagatggagaagctgtcggagaaaatgatgaagagggaggatgggacctt
gaagatttggagctaccccctgaagcagacacaccaaaggccaccaatgcacgctcatca
gtttttgttgctccaactcctggcatgtccgtgagccaaatctgggttcagaaatcatcc
cttgctgctgaacatgctgctgctggaaactttgacactgcaatgcgtttgcttaacagg
caacttggaatcaaaaactttgctccattaaaatccatgtttcttgatcttcaaactggc
agccattcctttcttcgtgcattttcatctgctccagtgatacctttggccgttgaacgc
gggtggaatgaatctgctagcccgaatgtgagaggccctccagccctcgtctacaatttc
tctcaattggaagagaagctcaaactaggatacaagtctacaactggtggaaggtttacc
gaggctcttcgtcttttcattagcattctccatacaattcctctgattgttgttgaatca
aggagagaagttgatgaagtcaaggagttgatcataatcgttaaagaatatgtgctaggt
ctgcaaatggagctgaagaggaaggaacttagagacgatccagtccgccagcaagagctt
gctgcctattttacccactgcaaccttcaactgcctcacttaaggctcgccttgcaaaat
gcaatgactatttgcttcaaagcgaagaaccttgctactgctgctaactttgccaggcgg
cttttggagaccaacccgcctaacgagaatcaatctaggacagccaggcaagtgttgcag
gctgctgagaggaacatgaccgatgcttcagagctgaactatgacttcagaaacccgttt
gtgatttgtggcgctacatacataccaatctaccgaggacaaaaagatgtttcttgcccg
tactgtacttctcggtttgtaccaagccaggagggacagctctgtgctgtttgtgatctt
gcgactgttggagctgatgcttctgggttgctgtgttgtcctgctcagattcggtaa

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