KEGG   Cannabis sativa (hemp): 115724492
Entry
115724492         CDS       T08987                                 
Name
(RefSeq) protein CHROMATIN REMODELING 35
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    115724492
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csav03400]
    115724492
DNA repair and recombination proteins [BR:csav03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     115724492
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD Helicase_C_2 TRADD-like_N
Other DBs
NCBI-GeneID: 115724492
NCBI-ProteinID: XP_030509643
LinkDB
Position
6:69561059..69566475
AA seq 897 aa
MSSNFELYPVSHKRPRFSIDGKYENGTTFNSSMGDDTVLKKPKPPTSPKVVDFSDPFAIQ
RMIDRLDCGKFGSVTKDIEALFAPKMQTLYPYFEKYPTLINQFFDAKKNNVDDDGATKLA
NQQLTPLAITCGNVIDLEDDCETNGKPTTSLAIINIDSDEEDKQEQAPSYHFLNVALNNT
TGEIVTKEIVTREIEVRNLTDRKDVEDVNCNGRTDAEIKKDSGVYLGVDDDGDDDSIPED
DGLGNIWNEMSMALEVSKDVATDPSSGEQVKEDEEGCDHSFILKDDLGYVCRVCGVIDKA
IEKIFEFQYLKVKSSRTYVTDSRRSKDRESAGIDGLNLSDDDLIIEELHAHPRHMKQMKP
HQEEGFDFLKSNLVGANPGGCILAHAPGSGKTFMIISFIQSFLAKYPSGRPLVILPKGIL
STWKKEFQIWQVEDFPLFDCYSVKADNRTQQLEVLKQWVEKKSILFLGYKQFSSIICDLE
NSEASISCREILLRVPSILILDEGHTPRNENTDVLQSLAKIQTPRKVVLSGTLYQNHVKE
VFNVLNLVRPKFLRMETSRPIVKRIMSKVDISSFRKNIKKTGGDGAFYDIVEGTLQKDTD
FRRKVSVIQDLREMTSKILHYYKGDFLDELPGLLDFTVVLNLSTKQKREVGKIKKLSRKF
KASSVGSAVYLHPKLQSFSDNWTASDAKMDELLENLDLEDGVKAKFFLNMLSLCDANQEK
LLVFSQYLVPLKFLERLATKAKGWCTGREIFVISGDTNSEQREWSMERFNNSSSAKVFFG
SIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKVFTYRLVAADSPEEED
HEACFKKELISKMWFEWNEYCGYQDFKVQPVDVKDCDDEFLENSQALAENVKALYKR
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgagctcaaatttcgaattgtaccctgtcagtcataaacgacctagattttctattgat
ggaaaatatgaaaatggaacaactttcaattccagtatgggtgatgacactgtgttgaag
aaaccaaaaccacctacttctccgaaagtagttgatttttctgatccctttgctattcaa
aggatgattgatcggttagattgtggtaagtttggaagtgtcacaaaagatatagaagcc
ctttttgctccaaagatgcaaactttgtacccatattttgaaaagtatccaacacttatt
aatcagttctttgatgcgaagaagaacaatgttgatgatgacggggctactaagttggca
aatcaacaattgactccgttggcaataacgtgtggcaatgtcattgatttggaggatgac
tgtgaaacaaatggtaaaccaacaacatcattggctatcataaatattgattctgacgag
gaagacaaacaagaacaggcaccttcttatcattttctaaatgttgccttgaataacaca
actggagaaattgtgacaaaggaaattgttacaagggaaatagaggtcaggaatcttaca
gatagaaaagatgtagaagatgttaactgtaatgggagaactgatgctgaaattaagaag
gatagtggtgtttatcttggtgtagatgatgatggtgatgatgacagtattcctgaggat
gatgggcttggaaatatttggaatgaaatgtcaatggcgttagaagtttccaaggatgtt
gctacagatccttcatcaggtgaacaagtgaaagaagatgaggaaggctgtgatcattct
tttatattaaaggatgatcttgggtacgtttgccgggtttgtggagttattgacaaagca
atcgaaaaaatatttgaattccagtacctgaaggtgaaaagttctcgaacttacgtgact
gactctcgaagatcaaaagacagagaatcagctggaatagatgggcttaacttgtctgat
gatgatttgataatcgaggaactgcatgcccaccccaggcatatgaagcaaatgaaacct
caccaagaggagggtttcgattttctcaagagcaatttggtgggtgctaatcctgggggt
tgcatcttggcccatgcacctggatcaggaaagacattcatgatcatcagttttattcaa
agttttcttgccaagtatccgagtggcagacccctagttattcttcccaaaggaatcctg
agcacatggaagaaagagttccagatttggcaggtagaggattttccattatttgactgt
tattctgtgaaagcagataaccgaacccagcaattggaggttttgaaacagtgggtagaa
aagaaaagcatccttttcttgggttacaaacagttttcgtcaattatttgtgatctagaa
aacagtgaggcatcaatttcgtgtcgtgagatattgcttagggttccatcaattcttatt
ctcgatgaaggacataccccaagaaacgagaatacagatgtgctgcaatctcttgccaag
atacagacacccagaaaagttgtgctttcaggaacactttatcagaaccacgtcaaagag
gtgttcaatgtcttgaatcttgttcgaccgaagtttttgagaatggaaacatctcgtcca
atcgtcaagcgcatcatgagtaaagttgatatatcgagttttaggaagaacatcaaaaaa
actggtggtgatggggctttctatgatatagtggagggtactctgcagaaagatacagat
ttcagaaggaaagtgtcggttatacaagatctgcgtgaaatgactagcaaaatccttcac
tactataaaggtgactttctggatgagctacctggattattagatttcacagtagtactt
aacctcagcactaaacagaaacgcgaagttggaaaaataaagaagttatcaagaaagttc
aaagctagctcggttggaagtgctgtttatctgcatcccaagttacaatcattttctgat
aattggactgcaagtgatgccaagatggatgagttgctagaaaacttggacttagaagat
ggagtaaaggcgaaatttttcctaaatatgctaagtttgtgcgacgctaatcaggagaag
ctattggttttcagtcagtacctagtgcctttgaagtttttagagagattagctacaaaa
gcgaagggttggtgtactggaagggaaatctttgtcatctcaggtgatacaaatagcgag
caacgagagtggtctatggaacgcttcaacaactcctcatcagccaaggttttctttggt
tcaatcaaagcttgtggagagggaatttctctggttggagcatcaagaattataattcta
gatgttcacttaaatccatcagtcacccgtcaagcaattgggcgtgcatttcgtccaggg
cagaaaaagaaagtgttcacgtacagattggttgctgctgactcacccgaagaggaagac
cacgaagcttgtttcaaaaaggaattgatctcgaagatgtggttcgaatggaatgaatat
tgtgggtatcaggatttcaaagtacagcctgtcgatgtcaaggactgcgacgatgaattc
ttggaaaacagtcaggccctggcggaaaatgtaaaggctctgtacaaaaggtag

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