Cannabis sativa (hemp): 115724492
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Entry
115724492 CDS
T08987
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115724492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115724492
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
115724492
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
TRADD-like_N
Motif
Other DBs
NCBI-GeneID:
115724492
NCBI-ProteinID:
XP_030509643
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Position
6:69561059..69566475
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AA seq
897 aa
AA seq
DB search
MSSNFELYPVSHKRPRFSIDGKYENGTTFNSSMGDDTVLKKPKPPTSPKVVDFSDPFAIQ
RMIDRLDCGKFGSVTKDIEALFAPKMQTLYPYFEKYPTLINQFFDAKKNNVDDDGATKLA
NQQLTPLAITCGNVIDLEDDCETNGKPTTSLAIINIDSDEEDKQEQAPSYHFLNVALNNT
TGEIVTKEIVTREIEVRNLTDRKDVEDVNCNGRTDAEIKKDSGVYLGVDDDGDDDSIPED
DGLGNIWNEMSMALEVSKDVATDPSSGEQVKEDEEGCDHSFILKDDLGYVCRVCGVIDKA
IEKIFEFQYLKVKSSRTYVTDSRRSKDRESAGIDGLNLSDDDLIIEELHAHPRHMKQMKP
HQEEGFDFLKSNLVGANPGGCILAHAPGSGKTFMIISFIQSFLAKYPSGRPLVILPKGIL
STWKKEFQIWQVEDFPLFDCYSVKADNRTQQLEVLKQWVEKKSILFLGYKQFSSIICDLE
NSEASISCREILLRVPSILILDEGHTPRNENTDVLQSLAKIQTPRKVVLSGTLYQNHVKE
VFNVLNLVRPKFLRMETSRPIVKRIMSKVDISSFRKNIKKTGGDGAFYDIVEGTLQKDTD
FRRKVSVIQDLREMTSKILHYYKGDFLDELPGLLDFTVVLNLSTKQKREVGKIKKLSRKF
KASSVGSAVYLHPKLQSFSDNWTASDAKMDELLENLDLEDGVKAKFFLNMLSLCDANQEK
LLVFSQYLVPLKFLERLATKAKGWCTGREIFVISGDTNSEQREWSMERFNNSSSAKVFFG
SIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKVFTYRLVAADSPEEED
HEACFKKELISKMWFEWNEYCGYQDFKVQPVDVKDCDDEFLENSQALAENVKALYKR
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaaatttcgaattgtaccctgtcagtcataaacgacctagattttctattgat
ggaaaatatgaaaatggaacaactttcaattccagtatgggtgatgacactgtgttgaag
aaaccaaaaccacctacttctccgaaagtagttgatttttctgatccctttgctattcaa
aggatgattgatcggttagattgtggtaagtttggaagtgtcacaaaagatatagaagcc
ctttttgctccaaagatgcaaactttgtacccatattttgaaaagtatccaacacttatt
aatcagttctttgatgcgaagaagaacaatgttgatgatgacggggctactaagttggca
aatcaacaattgactccgttggcaataacgtgtggcaatgtcattgatttggaggatgac
tgtgaaacaaatggtaaaccaacaacatcattggctatcataaatattgattctgacgag
gaagacaaacaagaacaggcaccttcttatcattttctaaatgttgccttgaataacaca
actggagaaattgtgacaaaggaaattgttacaagggaaatagaggtcaggaatcttaca
gatagaaaagatgtagaagatgttaactgtaatgggagaactgatgctgaaattaagaag
gatagtggtgtttatcttggtgtagatgatgatggtgatgatgacagtattcctgaggat
gatgggcttggaaatatttggaatgaaatgtcaatggcgttagaagtttccaaggatgtt
gctacagatccttcatcaggtgaacaagtgaaagaagatgaggaaggctgtgatcattct
tttatattaaaggatgatcttgggtacgtttgccgggtttgtggagttattgacaaagca
atcgaaaaaatatttgaattccagtacctgaaggtgaaaagttctcgaacttacgtgact
gactctcgaagatcaaaagacagagaatcagctggaatagatgggcttaacttgtctgat
gatgatttgataatcgaggaactgcatgcccaccccaggcatatgaagcaaatgaaacct
caccaagaggagggtttcgattttctcaagagcaatttggtgggtgctaatcctgggggt
tgcatcttggcccatgcacctggatcaggaaagacattcatgatcatcagttttattcaa
agttttcttgccaagtatccgagtggcagacccctagttattcttcccaaaggaatcctg
agcacatggaagaaagagttccagatttggcaggtagaggattttccattatttgactgt
tattctgtgaaagcagataaccgaacccagcaattggaggttttgaaacagtgggtagaa
aagaaaagcatccttttcttgggttacaaacagttttcgtcaattatttgtgatctagaa
aacagtgaggcatcaatttcgtgtcgtgagatattgcttagggttccatcaattcttatt
ctcgatgaaggacataccccaagaaacgagaatacagatgtgctgcaatctcttgccaag
atacagacacccagaaaagttgtgctttcaggaacactttatcagaaccacgtcaaagag
gtgttcaatgtcttgaatcttgttcgaccgaagtttttgagaatggaaacatctcgtcca
atcgtcaagcgcatcatgagtaaagttgatatatcgagttttaggaagaacatcaaaaaa
actggtggtgatggggctttctatgatatagtggagggtactctgcagaaagatacagat
ttcagaaggaaagtgtcggttatacaagatctgcgtgaaatgactagcaaaatccttcac
tactataaaggtgactttctggatgagctacctggattattagatttcacagtagtactt
aacctcagcactaaacagaaacgcgaagttggaaaaataaagaagttatcaagaaagttc
aaagctagctcggttggaagtgctgtttatctgcatcccaagttacaatcattttctgat
aattggactgcaagtgatgccaagatggatgagttgctagaaaacttggacttagaagat
ggagtaaaggcgaaatttttcctaaatatgctaagtttgtgcgacgctaatcaggagaag
ctattggttttcagtcagtacctagtgcctttgaagtttttagagagattagctacaaaa
gcgaagggttggtgtactggaagggaaatctttgtcatctcaggtgatacaaatagcgag
caacgagagtggtctatggaacgcttcaacaactcctcatcagccaaggttttctttggt
tcaatcaaagcttgtggagagggaatttctctggttggagcatcaagaattataattcta
gatgttcacttaaatccatcagtcacccgtcaagcaattgggcgtgcatttcgtccaggg
cagaaaaagaaagtgttcacgtacagattggttgctgctgactcacccgaagaggaagac
cacgaagcttgtttcaaaaaggaattgatctcgaagatgtggttcgaatggaatgaatat
tgtgggtatcaggatttcaaagtacagcctgtcgatgtcaaggactgcgacgatgaattc
ttggaaaacagtcaggccctggcggaaaatgtaaaggctctgtacaaaaggtag
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