Cannabis sativa (hemp): 115724600
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Entry
115724600 CDS
T08987
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
115724600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115724600
03029 Mitochondrial biogenesis [BR:
csav03029
]
115724600
Membrane trafficking [BR:
csav04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
115724600
Mitochondrial biogenesis [BR:
csav03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115724600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_Vps41
WD40
WD40_Prp19
Beta-prop_EML_2
BCAS3_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115724600
NCBI-ProteinID:
XP_030509776
UniProt:
A0A803QAT4
LinkDB
All DBs
Position
6:complement(7456776..7461155)
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AA seq
369 aa
AA seq
DB search
MANQSSSNLVLCASFNQDASCFVIGTRDGIKIYDSNTGRLFFERAIGAFTIAEMLFTSSL
LAIVGAGEQPSLSPRRLCLFNTMTGTALRELNFLTSILAVRMNKKRLVVVLQEKTYVYDI
NSLAILDTIDTVPNLKGLCAFSPNLDACFVALPASTTKGAVLLYNAMDLLSHCEIDAHRS
PLAAMTLSSNGMYIATASEQGTIIRVHMVSEATKSYSFRRGTYPSIIFSLSFGPSAELPD
ILVATGSSGSVHAFSLGFAICQRSRRSSIILGSIMPDSFSDALDPAHHGVLHSAAPAGVK
SYAVVRKVEKVTNSSTSEIIACRATISMVAYNGYFQEYSLTISSRDEYSWSLEREFNLQT
VISENPISS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccagtcttcctccaatctagtcctatgcgcttctttcaatcaggacgccagt
tgctttgttattggaactagagatggcatcaagatatatgattcgaatactggacggctt
ttcttcgaacgagctattggagcttttactattgccgaaatgctgtttacctctagtcta
cttgccattgttggagctggtgaacagccatctttatctccccgtcgtctatgtttattc
aatacgatgactggaactgccctccgagaattgaatttcttaacatcaattctagctgtt
cgcatgaataagaaaaggcttgttgtcgttctgcaagagaagacttatgtatacgacatt
aatagtctagcaatcttggacaccattgacacagttccgaatttaaaaggactgtgtgcg
ttctcccctaatttggatgcttgctttgtggcacttcctgctagcactaccaaaggagct
gtgttgttgtacaatgctatggatctgctgtctcattgtgagatagatgctcatcgttct
ccgctggctgcgatgaccctttcttccaatgggatgtacatagcaacagcatctgagcag
ggaaccataatcagagttcatatggtttctgaagcaactaagtcttacagttttcgaaga
gggacatatccatcaattatattttccttgtcatttggaccttccgcagagcttccagat
attcttgtggccacaggttcttcagggtcagttcatgcgttctctcttgggtttgccata
tgccagagaagcagaagatcaagtattattttgggatcgataatgcccgactctttttct
gatgcgttggatccagctcatcacggtgttcttcatagtgctgcaccagctggagttaaa
agctatgcagtagttaggaaggttgaaaaggttaccaactcgtcaacatctgagatcata
gcatgccgagccaccatttctatggttgcatacaatggttacttccaagagtacagctta
acaatcagtagccgggacgagtattcatggagtttggaacgtgaatttaatcttcaaacg
gtaatctcagaaaaccccattagctcatga
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