Cannabis sativa (hemp): 115724827
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Entry
115724827 CDS
T08987
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
csav
Cannabis sativa (hemp)
Pathway
csav04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115724827
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
LRR_8
LRR_4
AAA_14
LRR_RPS2
AAA_22
SesA
AAA_16
NACHT
PDZ_3
DUF6730
NTPase_1
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
115724827
NCBI-ProteinID:
XP_030510033
LinkDB
All DBs
Position
6:10032597..10036529
Genome browser
AA seq
947 aa
AA seq
DB search
MAENFLTPVIESLVHLLTNEVQSFKGVRRKVECLKRELEIIQCLLKDADAKSDRGELSDA
VKTWVKQLREEADHTEDVIDEYRRYVAQSTGDKRGFVGFLRKVGLQIKALKSRYPIASQI
RGINESLRRIKDEGRAYGLSQSLGLQRSSRENTYMEEHDSRLGSLFIVEDDEYVDVPSIQ
EELRRSLVEGGSSRTVTSMVGQGGIGKTTLVKKVFDEVKHNFDCHAWIDVSQSYDVKILV
KSMIQQMFEIAGCTSTSTREHHTIQGLITPLRQYLQAKSYLVVFDDVWNANFWEVIKHAL
PSNNKGNRIIITTRNSTIAAACKESPFDTVQKLETWSQEMAWKLFCKKAFRYEFESRCPE
ELESLSHKIVSKCQGLPLTIGTVAGLLSRTRKVQFEWQRALDNLDFEFQTNPELTRITKI
LSLSYHDLPYHLKSCLLYFGIFPEDYKISCDRMYELWIAEGLVKAYGNKTQKDVAKEYLN
ELIERNLVVFELYYGALPYCRAHDLIREFIYSRADDLCFCRVLDGKNLFGGKSRCLSIRG
SMKNVSETMKEYTSVRSVFLFNFNDDLIRNMSSLVTLLQTCKLLKVLDFEGAHLDYLPEE
IGYLFHLRYLNLKHTKIKVIPKCIGKLHNLQSLNLMFTLVQRLPKTIGKLHNLQNLNLKL
TLVQELPLEINKLQNLRHISSFFKDRTSSNTSSAHGTNLGVKIQEGFGYLENLETLEYVN
VHPSGVVSFINDLEKLMKLKALGLLKLTTETSRAISAANAKNLNHLEHLYLATTNEDYIL
DVEPLSESPPLQLQRLNLIGQLKELPRWISELWNLQALFLSFSKLTEDPLKYLKHLPNLT
SLRLRKSYEGDQLHFEEGGFQKLKDLTLLNLKELKLVKMDKGTLSQLKTLNIGSCRLMEE
IPAGIEHLRNLKELKIRDMTREFVVRIQPNGGLDYPKIQHIPMVHIF
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaattttttgacccctgtgattgagagtttggtgcacctgctaaccaatgaa
gtacaatcgtttaagggagttagaagaaaagttgaatgtctaaagagagagctagagatc
atccagtgtctcctcaaagatgcagatgcaaagtcggatagaggagagttgagtgatgct
gtgaaaacatgggtgaaacaactgcgggaggaggctgatcatacagaagatgtcatcgac
gaataccggcgttatgtggctcaaagcactggtgacaagcgtggatttgttggctttctc
aggaaagtaggcctccaaatcaaagccttgaagtcacgttatccaatagcttctcaaatt
cgcggcattaatgaatctctacgaagaatcaaggatgaaggacgagcatatggcttgagt
cagtccctcggtttacagaggtcgagtagagaaaacacatacatggaggagcatgactcg
cggttaggttccctgtttattgtggaagatgatgagtatgtggatgttccttccattcaa
gaggaattgagaaggagtttagttgaaggggggtcaagtcgtacagttacttcgatggta
ggccaaggaggaatcgggaaaactactcttgtcaagaaggtttttgatgaggtgaaacac
aattttgattgtcatgcttggattgatgtatctcaatcttatgatgtaaaaatactagta
aagagcatgatacagcaaatgtttgaaattgctggatgtactagtacttctacaagagaa
caccacacaatccaagggctaattactcctctcaggcaatacttgcaggcaaaaagttat
ttagttgtctttgatgatgtttggaatgctaacttttgggaagttataaaacatgctttg
ccaagtaataacaaaggcaatagaatcattatcacaacacgtaattctacaatagctgcg
gcctgtaaggaatccccattcgatactgtgcagaagctggaaacttggtctcaagaaatg
gcttggaagttattctgcaaaaaggcatttcgatacgagtttgagagtcgttgccctgag
gagttagagagcttatctcataaaattgttagtaaatgccaaggcttaccacttactatt
gggactgtggctggtttgttgtcaagaacaagaaaagttcaatttgaatggcaaagagct
cttgataatcttgattttgagttccaaacaaatcctgaacttacaagaattacgaaaatt
ctctctcttagctatcatgatttgccttaccatctcaaatcctgcttattgtatttcggc
atttttcctgaagattacaaaattagttgtgacagaatgtatgagttatggattgctgag
ggtttagttaaggcttatggtaacaagacacaaaaggatgtggctaaagagtacttgaat
gagctcattgaaagaaacttggtagtgtttgaactttattatggcgcattaccatattgt
cgagcccatgatttgattcgtgaattcatttattcaagagcagacgatttatgcttttgt
agagttcttgatggaaagaacttatttggaggaaaaagcaggtgcttatcaatccgaggc
agcatgaaaaatgtttcagaaacaatgaaagagtacaccagtgttcgttctgtgtttctt
ttcaatttcaatgatgatttgatcaggaacatgtcttccttagttactttgcttcaaact
tgtaagcttttaaaggtgttggactttgaaggcgctcatcttgattatctcccagaggag
attggatatttgtttcacttgaggtacttgaatttgaaacataccaagataaaagtgatt
cctaagtgcattggtaagctgcataatctacaaagtttaaatcttatgtttaccttagtg
cagaggcttccgaaaactattggcaaacttcataaccttcaaaatttgaatctcaagctc
accttagtgcaggagctaccattggaaataaataagctccaaaatcttcgacacattagt
agcttttttaaggacaggactagcagcaacactagtagtgcccatggcaccaaccttggg
gtgaaaattcaagaaggttttggctatttggagaacttagagacactagaatatgtgaat
gtgcatccttctggtgtagtttccttcattaacgatctagagaagttgatgaagttgaag
gcgctcggtcttttgaaactgacaacagaaacttcaagggctatttctgctgctaatgct
aagaacttgaaccaccttgagcatttgtacttagcaacaactaatgaagattacatcttg
gatgtggagccactttcggaatctcccccacttcagctgcagaggctcaacttaataggc
caactaaaggagctccctcgttggatttcagagctctggaatttacaggcattgttctta
tccttctcaaagttgacagaggatccactgaagtacttgaaacacttgcctaatctcacg
agtcttcggctacgcaaatcatatgaaggagaccaactacactttgaagagggtggtttt
caaaagctcaaggatctaactttgttgaatttgaaagaactaaagctggtgaagatggat
aaagggacattgtctcaacttaaaacactcaacattggttcttgcagattaatggaggag
attccagccggaatcgaacacttgagaaacctcaaagaacttaaaatccgggacatgaca
agggaatttgtggttcggattcagccaaatgggggtctagattatccaaaaattcaacat
ataccaatggttcatatattttaa
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