Cannabis sativa (hemp): 115724838
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Entry
115724838 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115724838
KO
K24755
WD repeat-containing protein 76
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csav04121
]
115724838
03036 Chromosome and associated proteins [BR:
csav03036
]
115724838
03400 DNA repair and recombination proteins [BR:
csav03400
]
115724838
Ubiquitin system [BR:
csav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115724838
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
115724838
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
115724838
DSBR (double strand breaks repair)
Other DSBR factors
Others
115724838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
115724838
NCBI-ProteinID:
XP_030510053
LinkDB
All DBs
Position
6:10136833..10139825
Genome browser
AA seq
580 aa
AA seq
DB search
MAPAKLTAYECQRLENIRRKEEMLAGLKLQSIVTQLSASSKRERIGGKANKVKPQKKPKS
DTPVALRRSLRTRGMQADSKILDGDLFESTVRSPNSRETKMGPLTMREALLHEGSDRSLI
ETILNTGIKSEPGQSLGTEFGGRRVCKEETVSSTGIKSEPGQSLETEFGGRRVCKEENVS
STVIKSEPGHSLGTEFGGRRVCKEETVSSNGIKSEPGQSLGTESGGDRVCKKETFSSTGI
KSEPSQSLGTEFGGDRIWVDMTLNPENVARVVQNRIMSVKFFPCSSSSIVVAGSKGGDVG
FWNLDHANGIDEEDDGVYSYHTHSGPVSGISIHQHSLSKVFTSCYDGYIRLMDAEKEVFD
LVYSSDDNKAIFSLSQRSNDAKCVYFGEGYGNLSMWDERTGGCATQWSLHGDRINSIDFN
LQNPNFVATSCSDGTACIWDLRSINTDKPKTLKTVTHKRAVYSAYFSPSGKCLATTSLDD
TVRILDGDNFEEASWIPHNNQTGRWISQFKAIWGWDDSYIFIGNMKRGVDVISPSKGTTI
VTLQSEHITAIPCRFDAHPYKIGMLAGATGGGQVYVWTRQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgcgaagcttacagcgtacgagtgtcagaggctcgagaatatccgtaggaag
gaagaaatgttggccgggctcaagcttcaatccattgttactcaactctccgcctcctca
aagcgtgagaggattggaggcaaagcaaacaaagtgaaaccgcagaagaaaccgaagagt
gacactcccgtcgctttgcgacgatctttacgaacaagaggaatgcaggctgattctaaa
atcctcgatggcgatcttttcgagtctacagtgagaagccctaactctcgcgagacgaag
atgggtcctctgactatgagagaagctttgcttcatgaggggtctgatcggtctctaata
gagaccattttaaatactggcataaaatctgagccgggtcagtctttaggaacagagttt
ggtggccgtagggtttgtaaagaggagaccgtttcgagtactgggatcaaatctgaaccg
ggtcagtctttagaaacagagtttggtgggcgtagggtttgtaaagaggagaacgtttcg
agtactgtgataaaatctgagccgggtcattctttaggaacagagtttggtgggcgtagg
gtttgtaaagaggagaccgtttcgagtaatgggataaaatctgagccgggtcagtcttta
ggaacagagtccggtggagatagggtttgtaaaaaggagaccttttcgagcactgggatc
aaatctgaaccgagtcagtctttaggaacagagtttggtggagataggatttgggttgat
atgactttgaatccagagaatgtagctcgggttgtccagaatcgaataatgtctgtgaag
tttttcccttgtagtagctctagtattgttgttgctgggagcaagggtggtgatgttggg
ttttggaatcttgatcatgcgaatgggattgatgaagaagatgatggggtttattcatat
catactcactcaggccctgtttctgggatttcgattcaccaacattccttgtcaaaggtc
tttaccagttgttatgatggatatatccggttgatggatgctgaaaaggaggtgtttgat
ttagtatattcttctgatgacaataaagctatattctcgctgtctcagcgatcaaatgat
gcaaagtgtgtatattttggtgaggggtatggtaatttgagtatgtgggatgagaggact
ggaggctgtgcaactcaatggagtttgcatggtgacagaattaactccattgattttaat
ttacaaaatccaaactttgtggcaacaagttgctctgatggaactgcttgcatttgggat
ttgagaagtattaatacagataagcctaaaactttgaagacggttacacacaaaagagct
gtatattcagcttatttttcaccctctggaaagtgcttggccaccacaagtttggatgat
accgttcgtatacttgacggagataactttgaggaggcctcatggattccacacaataat
caaacaggaagatggatttctcaattcaaggctatatggggctgggacgattcatatatt
tttattggtaacatgaagagaggagtggatgtcatctcaccttctaaaggaacaactatt
gtgacattacagagtgaacacataacagcaattccatgcagatttgatgcacacccttac
aaaattgggatgctagcaggagccacaggtggaggccaggtttatgtgtggactagacaa
tga
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