Cannabis sativa (hemp): 115724878
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Entry
115724878 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115724878
KO
K18469
TBC1 domain family member 5
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115724878
Membrane trafficking [BR:
csav04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115724878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
115724878
NCBI-ProteinID:
XP_030510103
UniProt:
A0A803Q836
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Position
6:complement(53578200..53583502)
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AA seq
835 aa
AA seq
DB search
MIPVPNESTLAESSGSSSSNSFSLKGSVDENRRFNGLRSVKWRINLGILPSSSSSPSSID
DLRRVTADSRRRYAGLRRRLLVDPHILKKGNSSSDVVIDNPLSQNPDSTWGRFFRNAELE
KMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHSEFGYRQGMHELLAPLLYVLHV
DVERLSHVRTVYEDHFMDKFDGLSFQDNDTYNFDYRRSSDYTEDNIDSHENVSKARSLNE
LDPEIQTIILLSDPYGAEGELGIVISEKFMEHDAYCLFDALMNGANGAVAMAEFFSPSPA
RESQSGLPPVIEASAALYHLLLFVDPSLHSHLVELGVEPQYFALRWLRVLFGREFSLGGL
LTIWDEIFASENKKLEKSGEDDGGSYGVLCSSRGAFISAVAVSMLLHLRSSLLGTEHATS
CLQRLLNFPENVDLKKLLEKAKSLQTLALNSNISSSSSYNGTFNHSKSMVVRGSSESIDS
SPTSPLNLVSVSYWEEKWRVHHREEELRKDSLKKNVPTQKKGWTDKVKLRLSRTESDPCP
SNFVKSKKNPKPSVRRRLLEDLSRELGLEDDMGNVGSHEVSGNTDIISAEVEHSREDGFC
QEIVCISEDRCSSGNAGSEENSSIFSDPTSPHSETNDHENDSEKSSVASNLSLDENDEHA
QNISEDSPLPISHPPEVVSQKSECKNDSLGNPVTELKEKKPISGKFQWFWKFGRNPTIEG
MSEKGGNSEATKSASEESHQKTSTVSEDDGSGNWESTKSGKGDVVDQNVMGTLKNLGHSM
LEHIQVIESVFQQDRATQAGSLENFSKNILVGKGQVTAMAALKELRKISNLLSEM
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgattccggttccgaatgagtcgacattggctgaatcgtctgggtcttcaagctcgaat
tccttttctcttaagggatctgtggatgagaatcgtcgtttcaatggacttagaagcgta
aagtggcgtataaatcttgggattttgccatcgtcgtcttcttccccttcttccattgac
gatcttcgtcgcgtcacagctgattctcgtaggagatatgctggattaagaagacgcctt
cttgttgatccacatatcctgaagaaagggaacagttcttcagatgtggtcattgacaat
ccactgtcgcaaaacccagatagcacttggggtcgcttctttcgaaatgcggaactggag
aaaatggttgaccaagatttatccaggttatacccagaacatgggagctacttccagaca
ccaggatgccagggcatgttaagaagaatattgttattgtggtgccttagacattctgag
tttggttacagacaaggaatgcatgaactcttggctcctcttctatatgttcttcatgtt
gatgtagagcgtctttcacatgtgcgaacagtctatgaagaccatttcatggacaaattt
gatggtctatcatttcaagacaatgatacatataattttgattacagaagatcttctgat
tatactgaagataacattgactcccatgaaaatgtgtcaaaagcgagaagtcttaatgag
cttgatcctgagatacagacaataatattactaagtgacccttatggtgctgaaggtgaa
ttgggtattgttatttcagagaaatttatggagcatgatgcttattgcctgtttgatgct
ttgatgaatggagccaatggtgcagttgccatggcagagttcttctctccatctcctgct
cgtgaatcccaatctggcttaccccctgtgattgaagcttctgctgcattgtatcatctg
ttgttgtttgttgacccatctctacatagccatctagtggagcttggtgttgagccacag
tattttgcactccgctggttgcgagtcctatttggacgtgaattttcgctaggaggtctg
ttgacaatttgggatgagatattcgcatcagaaaataaaaaattggagaaaagtggagaa
gatgatggaggctcatatggggtcctttgttcttctcgaggagcatttatttcagctgta
gcagtttctatgttacttcatttgagatcttccttacttggcactgagcatgctacttca
tgtcttcagaggttattgaatttccctgagaatgtggatttgaaaaaattgttggagaaa
gccaagtctctgcagactcttgcattgaacagtaatatctcatcttcatcctcttataat
ggaacttttaaccactctaaatctatggttgtgagaggttccagtgaatcaattgattct
tctccaacgtctccattaaatttggtatctgtaagttactgggaagagaagtggagagtt
caccatagagaagaagagctcagaaaagatagcttgaagaaaaatgttccaacacagaag
aaaggatggaccgataaagtaaaattaagactgtctagaacggagtcagacccatgtcca
agcaattttgtgaaaagcaaaaagaaccctaagccatctgttaggcgacgattgctggaa
gatctttcccgggaacttggtttggaagatgatatgggcaatgtaggtagtcatgaagtt
tcaggcaatacagatattatttcagcagaagtagaacatagtagagaagatggtttttgt
caggagattgtctgcatttctgaggatagatgttcgagcggaaatgctgggagtgaagaa
aattcatctattttctcagatccaacaagtcctcatagtgaaactaatgatcatgaaaat
gattcagagaaaagtagtgttgcatctaatttatctcttgacgagaatgatgaacatgcc
cagaatatttcggaggattcaccacttccaatttctcatccccccgaggttgtctctcaa
aaatctgaatgcaaaaatgattcactgggaaatccagtgacagagttaaaagagaaaaaa
cctatttcaggtaaatttcaatggttttggaagtttggaaggaatcctactattgaaggg
atgtctgagaaaggaggcaattctgaggctacaaagtctgccagtgaagaaagtcatcag
aaaacttcaactgtttctgaggatgatgggtctggtaattgggagtctacaaagtctggc
aaaggagatgtcgttgatcagaatgtgatgggtactttaaagaatcttgggcattctatg
cttgaacatattcaggtaatcgagtcggtattccaacaagatagggcgactcaagcaggg
tcattggagaatttctcgaaaaacattctagtaggcaaaggacaagtaacagcaatggct
gctctcaaggaacttcgaaaaataagcaatcttttatcagagatgtga
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