Cannabis sativa (hemp): 115724941
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Entry
115724941 CDS
T08987
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csav04131
]
115724941
Membrane trafficking [BR:
csav04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
115724941
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_2
RasGEF_N_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
115724941
NCBI-ProteinID:
XP_030510176
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Position
6:20010081..20021064
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AA seq
1243 aa
AA seq
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MANFLAQFQTIKNSCDHLVIAVEDVSDLWPTVKTGFEERFPLKRACLNNKTRNPVFVENL
PAEFILTTDARLRSRFPQEQYLFWFREPYATVVLVTCEGLDEFKTILKPRLKLIVQNDER
EWFIVYVSKAHPSNDQATKMAKKVYARLEVDFSSKKRERCCKYDLHSPEANFWEDLESKI
VESIRNTLDKRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFIFEIAHLHEDALREY
DELEICYLETVSIPGKQRDFGGVDHGDDQASLLNPGRKPLTQIVQDDSFREFEFRQYLFA
CQSKLLFKLGRPFEVAARGFAFIISFSKALTQHENILPFCMREVWVISACMDLISSTASH
YNEGVVAADIEKEFYRLQGDLYSLCRVKFMRLAYLIGFGTNIERSPVNSASLSMLPWPKP
AVWPLLPPDASSKVLVKEKMILQETPLVKHFGIQRKPLPLEPSFLLREANRRRASLSVGN
MFEISGSDSISKMSPTNKLHTSSMTRTNSSPGMDSSIDRPMRLAEIYVAAEHALHNTISN
TELWKSFSSVEDFEQKYLDLTKGAADNYHRSWWKRHGVVLDGEIAAVCFKHGNFDLAAKS
YEKVCALYAGEGWQDLLAEVLPNLAECQKILDDEAGYLSSCVRLLSLDKSLFLTKERQAF
QSEVVRLAHSEMKQPVPLDVSSLITFSGNPGPPIELCDGDPGILSVTVWSGFPEDITLDS
LSLTLMATFNADEGVKALKSSSAIVLKPGRNTITLDLPPQKPGSYVLGVLTGQIGHLRFR
SHSFSKGGPADTDDFLSYEKPTRPILKVFKPRPLVDLAAAVSSALLINESQWVGIIVRPI
NYSLKDAVLHIDTGPGLRIEESHVIEMESYADSSKGSTEKKSDSALENGSTVSRKYEQLT
LHDGRIEFPDWASNIASILWIPVRAISDKLARGSSSAIPQRTSIVDGMRTIALKLEFGIS
HNQTFDRTLAVHFTDPFHVSMRVADKCNDGTLLLQIFLHSEVKATLTVYDAWLDLQDGFV
HAGQRDGRPASGFFPLVLSPNARAGILFIICLGKIVPEDEVKDLQSESILNIKYGISGDR
NLGAHAPSGTMTSAPEDAKQELVFRSALVLQRPVLDPCLAVGFLPLPGLRVGQLVTMKWR
VERLKDLQNEVLQQRDEVLYEVNANKENWMIAGRKRGHVSLSEKQGSRLEISILCVPLVA
GYVRPPQLGLPDVDEANISCNPPSPHLVCVLPPALSSSFCIPA
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattttctagctcagttccagacaatcaagaattcctgtgatcacctcgtcatt
gctgttgaagatgtgagtgatttatggcccactgtgaagactggttttgaggagcgtttt
ccattgaaaagagcctgcttgaacaataagacccggaatcctgtgtttgtggagaatttg
cctgccgaattcattttaacaacagatgcgagacttcgcagccggtttccgcaggagcaa
tacttattttggtttcgagaaccatatgcaactgttgtccttgtcacttgtgagggcctt
gatgagttcaaaaccatcttgaaaccacgcctgaaattaatcgtccaaaatgatgaacgg
gaatggtttattgtttatgtctctaaggctcatccaagtaatgatcaggctaccaaaatg
gcaaaaaaagtatatgctagacttgaagttgattttagctcaaagaaaagagaaaggtgc
tgcaaatatgatttacattcccctgaagcaaatttttgggaagacttagaatctaagatt
gtggaatctattagaaataccttggacaagcgtgtacagttttacgaggatgagatacgc
aaactcagtgaacaacgactcatgccagtgtggaacttctgcaatttttttattctgaag
gaaagcttggcttttatatttgagattgctcatcttcatgaagacgctctacgtgaatat
gatgaacttgaaatttgctatttagaaacagttagtatacctggaaaacaaagggacttt
ggaggagtagaccatggtgatgatcaggcatcactgcttaatcctgggagaaagccacta
acacagattgtccaggatgactcatttagggaatttgaatttagacaatatctttttgct
tgtcaatcaaagcttttgttcaagctgggtcgcccctttgaggttgcggcaaggggtttc
gcattcattattagtttctcaaaggccctgacccagcatgagaatattctacctttttgt
atgcgtgaagtatgggtaatatctgcttgcatggatttgatcagctcaactgcctcacat
tataacgaaggagtagtggcagctgatatagaaaaggagttctacagacttcagggtgac
ctttattcactatgcagggttaagttcatgagacttgcatatttgattggattcggaaca
aatatagaaagaagccctgtcaacagtgcatcacttagtatgctaccttggcccaaacca
gcagtatggcctttacttccacctgatgcatcatccaaagtgttggtaaaagaaaagatg
attcttcaagaaactccactagtcaagcactttggtattcagaggaaaccattgcctctt
gaaccttcttttcttctacgtgaggctaatcgacgaagagcttctctgtctgttggaaat
atgtttgaaatatcaggttcagattcaatttcaaagatgtccccaacaaataaattacat
acaagctccatgacacgtactaattcttctccgggaatggacagctcaattgatagacct
atgagacttgcagaaatttatgttgctgctgaacatgctttgcacaatactatttccaat
actgagttgtggaagtccttctcatctgttgaagattttgagcaaaaatacttggaccta
acaaagggtgctgcagacaattaccaccgatcttggtggaaaagacatggagttgttctt
gatggtgaaatagcagctgtttgttttaagcatgggaactttgatctagctgcaaaatca
tatgagaaggtttgtgccctttatgctggtgaaggatggcaggatctattagcagaggtc
ctgcccaatttagcagagtgtcaaaagatactggatgacgaagctggttacctatcatct
tgtgtgagattactttcactagataaaagcttgtttttaaccaaagaacgccaagcattt
cagtcagaggttgttcgtcttgctcatagtgaaatgaaacaacctgtgcctctagatgta
tcttcattgattacattctctgggaatcctgggcctccaattgaattatgcgatggggat
cctggcattctctctgtaaccgtttggagtggctttcctgaagatataactcttgactca
cttagtttgacactgatggctacttttaatgctgatgagggtgttaaggcactcaaaagc
tcaagtgccattgtactaaaacctggtcggaacacaattaccttagatttaccgccccaa
aagccaggttcctatgtcttgggtgttcttactgggcagattgggcacttaagattcaga
tctcacagcttttcaaagggaggccctgcagacactgatgattttttgagttatgaaaag
cctacaagaccaatcttgaaggttttcaaaccaagaccgttggttgatcttgctgcagct
gtttcatctgctttgcttataaatgagtcacagtgggttgggattatagtgaggcccatt
aactactccctgaaagatgctgtattgcatatcgatactggtcctggccttagaattgaa
gagtcgcatgtaattgagatggaaagctatgcagattcatctaagggttccaccgaaaag
aaaagtgacagtgctttggaaaatggttctactgtcagtagaaaatatgagcagttgaca
ctccatgatggtagaatagagtttccggattgggcaagcaatatagcgtcaattttgtgg
attcctgtccgcgctatcagtgacaagctggcaagaggatcctcttcagctattccccag
agaacgagcattgtagatggcatgaggactattgccctaaaacttgaattcggaatatct
cataaccaaacatttgacaggactctcgctgtgcatttcactgatcctttccatgtgagc
atgcgagttgctgataaatgcaatgacggtactttgcttctgcagatttttttacattct
gaagtaaaagccacactgacagtctacgatgcttggcttgatctgcaagatggatttgtc
catgctggacaacgtgatgggagaccggcctctggcttctttccacttgtcctttctccg
aatgccagagctggaatcttgtttattatatgcttagggaagatagtacctgaggatgaa
gttaaggatctacaatcagagagtatactgaacataaaatatggaatttctggtgataga
aatttgggagcacatgctccttctggtacaatgacttctgcaccagaggatgctaaacag
gaattagttttccggagtgctcttgttttgcagaggcctgtccttgacccgtgtttagct
gttggatttcttcctctccctggccttagagttgggcagcttgttaccatgaaatggaga
gttgaaaggttaaaagatttgcagaatgaagttttgcagcagcgtgatgaagttttatac
gaagtcaatgcaaataaagaaaattggatgattgctggaaggaaaagagggcatgtatct
ttatctgaaaaacaaggttcaaggctagaaatctctatattatgtgtgcccttggtggcg
ggttatgtacgaccccctcaacttgggttaccggatgttgatgaggcaaatataagctgt
aatccacccagtccccatctcgtctgtgtattacctccagctctcagctcctccttctgc
ataccagcttga
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