Cannabis sativa (hemp): 115724960
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Entry
115724960 CDS
T08987
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115724960
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csav01007
]
115724960
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csav03016
]
115724960
Enzymes [BR:
csav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
115724960
Amino acid related enzymes [BR:
csav01007
]
Aminoacyl-tRNA synthetase
Class II (A)
115724960
Transfer RNA biogenesis [BR:
csav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
115724960
Prokaryotic type
Other AARSs
115724960
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF7661
Motif
Other DBs
NCBI-GeneID:
115724960
NCBI-ProteinID:
XP_030510203
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All DBs
Position
6:complement(45883700..45890307)
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AA seq
612 aa
AA seq
DB search
MADPVDQAAKSVSDLSMDASSDTMSKNARKKELKIKQKEEERRRKEEEKAKQAAAAPSTQ
AKKSATADDEDMDPTQYFENRIKYLASQKTEGHNPYPHKFFVSMSIVEYIENYGSLSNGE
HQEDVTVSLAGRIMSKRSSSSKLFFYDLHGGGAKVQVMADASKSDMDEAEFSRFHSSVKR
GDIVGVSGFPGKTKRGELSIFPKSFMVLSHCLHMMPRQKAVTGSENTNLKKTDAWVPGST
RNPETYILKDQETRYRQRYLDLMLNSEVRQIFKTRSKIISYIRKFLDNLDFLEVETPMMN
MIAGGAAARPFVTHHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHN
PEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKIRYHANGLDAEPIEIDFTPPFR
RIDMIGELERMANLNIPKDLASDEANKYLKDACVRYEIKCAPPETTTRLLDKLVGHFLEE
TCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFAE
QLKDRASGDDEAMAFDETFCTALEYGLPPTGGWGLGIDRLSMLFTDSQNIKEVLLFPAMK
PQDEAPIKVTAA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccagttgatcaagctgccaaatctgtctccgatttatcaatggatgcttca
tctgatactatgagcaagaatgcacgcaagaaggagttaaagattaagcagaaggaagag
gaaagacggcgaaaggaagaagaaaaagctaagcaggctgctgcagcacctagcacacag
gctaagaaatctgcaacagctgatgatgaagacatggatccaacgcaatactttgaaaac
aggatcaagtatcttgcatctcaaaagacagaaggtcataatccttatcctcataaattc
ttcgtatctatgtctattgttgaatacatagagaattatggaagcttaagcaatggggag
catcaagaggatgttacggtatctttagctggccgaattatgagcaaacggtcgtcttcc
tcaaaacttttcttttatgatttacatggtgggggtgctaaggtccaagtgatggctgat
gccagcaagtcagacatggatgaagctgaattttctaggttccattcaagtgttaagcgt
ggtgatattgttggtgtctctggttttccaggaaaaactaaaagaggggagttgagtatt
ttcccaaaatcattcatggtcttatcccattgtcttcacatgatgccaaggcagaaagct
gtgactggttcagagaatacaaatttgaagaaaactgatgcatgggtccccggaagtacc
aggaatcctgaaacatacatattgaaagatcaggaaactcgatatcgccaacgttatctg
gatttgatgctgaattcggaggtccgacaaatttttaagacccggtctaagatcatttca
tatattagaaagtttcttgacaatcttgatttcttggaggttgaaactccaatgatgaac
atgattgctggtggagcagctgcccgtcctttcgtgactcatcacaatgatcttaatatg
aagcttttcatgagaattgctcctgaactttatcttaaggagctggttgttggtggactt
gatcgtgtatatgagataggaaaacagtttaggaacgagggtatagatttaacacataat
cctgaattcactacctgcgaattttatatggcatttgcagactataatgatctgatggaa
ctaactgagaaaatgttgagtggaatggtcaaggaacttacgggcggatataaaattagg
tatcatgcaaatggacttgatgcagaaccaattgagattgactttaccccacctttcaga
aggattgatatgatcggggaattagagaggatggccaatcttaatataccaaaggacctt
gccagtgatgaagcaaacaaatatttgaaggatgcttgcgtaagatatgaaatcaaatgt
gcacctcctgagacaacaacccgtttattggacaagcttgtgggtcactttttggaagag
acttgtgtaaacccaactttcattattaaccatccagagataatgagtcctctggcaaag
tggcatagatcaaaaccaggcttgactgaacgttttgagttattcatcaataagcatgaa
ctttgcaatgcgtacactgagttaaatgatccagttgtacaacgacagcggtttgctgag
caactgaaggaccgggcatcaggtgatgatgaagctatggcctttgatgagacattttgt
actgctcttgagtacgggttacctccaactggtggctggggattgggtattgaccggctc
tctatgttatttactgattcccagaatatcaaggaagttctacttttccctgccatgaaa
ccacaagacgaagctccaatcaaagttacagcggcttag
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