Cannabis sativa (hemp): 115725070
Help
Entry
115725070 CDS
T08987
Name
(RefSeq) probable galacturonosyltransferase 9
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00520
Amino sugar and nucleotide sugar metabolism
csav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
115725070
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
csav01003
]
115725070
Enzymes [BR:
csav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
115725070
Glycosyltransferases [BR:
csav01003
]
Polysaccharide
Structural polysaccharide
115725070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF4032
Nbl1_Borealin_N
Motif
Other DBs
NCBI-GeneID:
115725070
NCBI-ProteinID:
XP_060973492
LinkDB
All DBs
Position
6:complement(68538486..68541620)
Genome browser
AA seq
561 aa
AA seq
DB search
MAVAVRGSRGGGGGLGFGGFSFRSFFSYRIFVSAMFSLLFIATLSVLLTTNPSTPHHRDS
TLPSNGIHRTFLALQSDPLKTRLDLIYKQASDHMTLVNAYAAYARKLKLDISKHLRLFND
LASDISDLQMKPTYRTSLFESDGPVDEDVLRQFEKEVKDKVKTARSMVAESKENYDTQLK
IQKLKDTIFAVNELLMKAKKNGAFASLIAAKSVPKSLHCLAMRLVGERISNPEKYRDEGP
KPEFEDPSLYHYAIFSDNVIAVSVVVRSVVKNAAEPWKHVFHVVTDRMNLAAMKVWFKMR
PAEGGAYVEVKAVEDYTFLNSSYVPVLRQLESANLQKFYFQNQQENATKDTSNMKFRNPK
YLSMLNHLRFYLPEMYPKLHKILFLDDDVVVQKDLTGLWKIDLDGKVNGAVETCFGSFHR
YAQYLNFTHPLIRDKFNPKACAWAYGMNIFDLDAWRREKSTEQYHYWQNLNADRSLWKLG
TLPPGLITFYSTTKSLDKSWHVLGLGYNPSISMDEINKAAVIHYNGNMKPWLDIAMNQYK
NLWTKYVDNDMEFVQMCNFGL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgttcgaggaagccgtggtggaggaggtggattgggttttggtggcttc
agtttccggagcttcttctcctatcggatctttgtttctgctatgttttcgcttctcttc
attgccacgctctctgttcttcttaccacaaatccttcaactccacaccaccgtgattct
acacttccgagtaatggtatacatagaacgtttcttgctttgcaatctgatcctttaaag
actagattagatttgatttataagcaagcaagtgatcatatgactttggtgaatgcttat
gcggcttatgcaagaaagcttaagcttgatatatctaaacatttgagattgttcaatgat
ttggcttcggatatttcggatcttcaaatgaaacccacttaccgaacgtccttgtttgaa
tctgatggtccggttgatgaggatgttttaagacagtttgagaaggaggtgaaagataag
gttaaaactgcaagatcaatggttgcggaatcgaaagagaattatgatactcagctaaag
attcagaagttgaaggataccatttttgcagttaatgagttgcttatgaaggcgaaaaag
aatggtgctttcgcgagcttgattgctgcaaaatcagtaccgaagagtttgcattgtctt
gctatgaggcttgttggggaaagaatttcgaatccagagaagtatagggatgaagggcct
aaacctgaatttgaagatccaagtttgtatcattatgcaattttctcagataatgtgatt
gcagtatcggttgtagttagatctgttgttaagaatgctgcagaaccttggaaacatgtt
tttcatgtggttacagacaggatgaaccttgcagcaatgaaagtttggtttaagatgcgg
ccagcggaaggaggtgcatatgtggaggtgaaggcagtggaggactatactttcttgaat
tcttcttacgtgccggttttgaggcagcttgagtcagcaaatctgcagaagttttacttt
cagaatcagcaggagaatgcaacaaaggatacaagcaacatgaagttcaggaacccaaag
tacttgtcaatgttgaatcaccttcgattttatttgccggagatgtatccaaagctgcac
aaaattctttttttggatgatgatgttgttgtgcagaaagacttgactgggttgtggaag
attgatttggatggaaaagtgaatggggctgttgaaacttgctttggttctttccatcga
tacgcccaatatttgaatttcacacaccctctaatcagagataagtttaatcccaaggct
tgtgcttgggcttatgggatgaatatatttgatcttgatgcttggaggcgtgagaaatcc
acagagcaataccattactggcagaacttgaatgcagatcgttcgttatggaaacttggg
actcttccaccgggtctgatcactttctactcgacaacaaagtcattggacaaatcttgg
catgtgcttggacttggatacaatcctagtataagcatggacgaaatcaacaaagctgca
gtcattcactacaatggaaacatgaaaccttggctcgacattgctatgaaccagtataag
aatctttggaccaaatatgtggataacgacatggagttcgtccaaatgtgcaattttggc
ttatag
DBGET
integrated database retrieval system
