Cannabis sativa (hemp): 115725096
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Entry
115725096 CDS
T08987
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csav03009
]
115725096
Enzymes [BR:
csav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
115725096
Ribosome biogenesis [BR:
csav03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115725096
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
115725096
NCBI-ProteinID:
XP_030510380
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All DBs
Position
6:complement(11077520..11082463)
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AA seq
629 aa
AA seq
DB search
MAGVALLNKKKGGKAKANAQKASLKKKQSDDLFTAKKSQKEDHSDVSSDEEENEEEIKGF
EESDGDDEDDSDLGSNISSDDDNPETDDFLQEDGSGADSGLDSDSDSDGDIEAKSRAIDE
EKQREEEEAMEEMQLNIKDESDEFRLPTRKELEEESQGPPDLQNLQRRIKEIVRVLSNFK
ALRQEGATRKDYVDQLKKDLSTSYGYNEFLIGALVEMFPVVELMELLEAFEKPRPTCLRT
NTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGYYMLQSASSF
LPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGMIFANEMKVPRLKSLTANLNRMGV
TNTVVCNYDGKELPKVLGINSVDRVLLDAPCSGTGVISKDESVKITKSLDEIQKCAHLQK
QLLLAAIDMVDANSKSGGYIVYSTCSIMVAENEAVVDYALKRRNVKLVPCGLDFGVPGFI
RFREQRFHTSLEKTRRFYPHVHNMDGFFVAKLQKMGNVKPASESSEATETVEQDVEPNEN
GDDEEAATEKDVKENSKDIKIARKEKKDSVKENKVIKKDITENGKKDVTQNGKKEYPPRG
RKRKFPSREELSRIREEKRSALRHKKSTH
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctggagttgctcttcttaataagaaaaaaggtggtaaggccaaggccaatgcccaa
aaagcttctctaaaaaagaagcaaagtgatgatcttttcactgctaagaagtcccagaaa
gaagaccattctgatgtctcctctgatgaagaggaaaacgaagaagaaataaagggtttt
gaagagtctgatggagatgatgaagatgactctgatttgggttccaacatctcttctgat
gatgataatcctgagactgatgatttcctccaagaagatggttcaggggctgattcaggt
ttggattcggattctgattcggatggagatattgaggccaagtcaagagctatcgatgaa
gaaaagcaaagggaagaggaagaagcaatggaagaaatgcagttgaatattaaagatgaa
tccgacgagtttaggttacctactaggaaggaacttgaagaagagtctcaaggacctcct
gatcttcagaatctccagaggagaatcaaagagattgttcgagtgctctcaaattttaag
gctttgaggcaagaaggggcaacaaggaaagattacgttgatcaacttaagaaagattta
agcacttcctatggatataatgaatttttaattggagctctagttgagatgtttcctgtt
gttgaattgatggaacttctagaagcttttgaaaagcctcgaccaacttgtctccgaact
aacactttgaagactcgaagacgggatttggcagatgttctaattaatagaggagtaaat
ttggatcccttaagcaagtggtctaaagttggactggttgtgtatgattcacaagttcct
attggtgcaactccagagtatatggcaggttattacatgctccaaagtgcaagttccttt
ttgcctgtcatggccctagcaccacaagaaaaggaaaggattgttgatatggctgctgca
cctggtggtaaaacaacttacattgccgctctaatgaaaaatagtggaatgatttttgca
aatgagatgaaggtgccaaggctcaagtcactcactgcaaatctgaatcgcatgggtgtg
accaatactgtcgtctgcaactatgatggaaaggagctacctaaagttttgggtatcaac
tctgttgatagagtgttattggatgctccttgtagtgggacaggggttatatcaaaagat
gagtctgttaaaattactaaaagcttagatgaaatccagaaatgtgcacatttgcagaag
caattgctactcgccgcaattgatatggttgatgccaattcaaaatctggagggtacatt
gtttactccacctgctccataatggttgctgagaatgaggcagttgttgactacgcactc
aagagaagaaatgttaagctcgtgccatgtgggcttgactttggggttccagggtttatt
cggtttagagaacagcgattccacacatctttagagaagacaaggcgtttctatcctcat
gttcacaatatggatggattttttgttgcaaagctccaaaagatgggcaatgtaaaacca
gccagtgaatcatcagaagcaacggaaacagtggagcaagatgttgaacctaacgaaaat
ggcgatgatgaagaagcagcaacagaaaaagatgttaaagagaattcgaaggatatcaag
atcgcccgaaaagagaaaaaggacagtgtaaaagaaaacaaggttatcaagaaagatatt
actgaaaatgggaagaaagatgtcactcaaaatgggaagaaagaataccctccccgaggc
aggaaaagaaaatttccttcaagagaggaactctcgagaatcagggaagagaaaagaagt
gctttgaggcataaaaagtctacccactga
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