KEGG   Cannabis sativa (hemp): 115725120
Entry
115725120         CDS       T08987                                 
Name
(RefSeq) uncharacterized protein LOC115725120
  KO
K24739  WD repeat-containing protein 13
Organism
csav  Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:csav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:csav04990]
    115725120
Domain-containing proteins not elsewhere classified [BR:csav04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   115725120
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_EML WD40_Gbeta Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_RIG_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_VPS8 Pep3_Vps18 Beta-prop_EMC1_N CPSF_A KNTC1_N WD40_like Beta-prop_SPT8 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 115725120
NCBI-ProteinID: XP_030510410
LinkDB
Position
6:69683054..69688185
AA seq 472 aa
MADQSDPVQVAKENVDPEFFSCLLQPTTSDADLNYIGIRRFLLHRKAESGVLRRRDWRCN
GKGYVAYRNYIRRPRNWEHMHQPSLNSTPGNSGRWIPPSPLSLLYEAESWSSVRDMQSGK
PASSHRNSFSSTASDSDRPRFRGVEPPYSFVGMHCVFDQSQASVTVLKFGHMNSDLLAYG
SSDGTLTVCTISDPPSVMKQLKGHSKDVTDFDFSSNNQYIASSSLDKTVRVWEISQGLCI
RVIYGVSSQLCIRFHPVNNNFLSVGNANKEIMVFNFSTGRIISKAVFDSGVTSMDHDHTG
QLIFCGDSLGSIYSVSMNSHTGALSRSHRYRDSSRKKSAVTTVQYRSFSLMARTPVLLTC
TQDGNLSFFSIALEVRGYLTLRCSLKLTPRVHSIRASFCPLLSPEKGEYIVAGSEDSNVY
FYDLTRPKHTCVNKLQGHRFPVMDVAWNHGANLLASSDFYGTVIVWKRSKTS
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggcggaccagagtgatccggtacaagtggccaaggagaatgtagatcccgaatttttc
agctgcttgcttcagccaacaacttccgatgccgatcttaactacatcggaatccgtcgc
ttccttctccatcgtaaggccgagtccggtgttcttcgccgtagagattggagatgcaat
ggaaaaggttatgtggcttaccgaaattacattcgcagaccaaggaattgggaacatatg
catcaaccaagcctcaatagcacaccagggaacagcgggcgatggatacctccaagtcca
ctatccctgttgtatgaagcagagagctggagttctgtaagggacatgcaaagtggcaaa
ccagcttcaagtcacagaaacagttttagctcaactgctagtgatagtgatcgcccacga
tttcggggtgttgaacctccatactcgttcgtgggaatgcactgtgtctttgatcaaagc
caggcctccgttacggtcttgaagtttggacacatgaattctgatctacttgcatatgga
tcgtcggatggaacattgacagtgtgcacgatctctgaccccccttcagttatgaaacag
ttgaaaggccattcgaaagatgttacagatttcgatttctcatcgaacaatcagtatatt
gcatcatcatcattggataagactgtgcgagtatgggagatatcacaaggtctttgtatt
agagtaatatatggtgtttcttcacaattgtgcattcgttttcaccctgtaaataacaat
ttcctttctgttggcaatgctaacaaagaaattatggtgttcaatttcagtaccggaagg
attattagtaaagcagtatttgatagtggagttacctctatggatcatgatcacactggc
cagctcattttttgtggcgattcgctgggctctatatactctgtaagtatgaactctcac
acaggagcattatcccgttctcatcgctaccgagacagtagcaggaaaaaatctgcagtc
acaactgtgcaataccggagtttctctctaatggctcgtaccccagtgttgttgacatgt
actcaagatggaaatttatctttcttcagtattgctctagaagttcgaggctatttgact
cttcggtgctctctcaaattaaccccgcgagtacacagcatcagggcttccttctgtccc
ctactttcccccgagaaaggagaatatattgtggcgggaagtgaggattcgaatgtatac
ttctacgatctaacccgaccgaagcatacatgtgtaaacaagctacagggtcataggttt
ccggttatggatgttgcctggaatcatggagcaaacttattggcttcatctgatttttat
ggcacggttattgtgtggaagagatcaaagacaagttaa

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