Cannabis sativa (hemp): 115725133
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Entry
115725133 CDS
T08987
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115725133
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115725133
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
PMG
MOEP19
Motif
Other DBs
NCBI-GeneID:
115725133
NCBI-ProteinID:
XP_060973282
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Position
6:54723161..54729481
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AA seq
537 aa
AA seq
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MATNEPAVNGVAKAPESVLQSLVPTNTVTETGATTTSASEAETAVAPSTESQLESASAPP
SATITAADKRWPGWPGDCVFRLIVPVVKVGSIIGRKGELIKKMCEETRARIRVLDGAVGT
PDRIVLISGKEEPDITLSPAMDAVIRVFKRVSGLSESEVDGKVPGAAGAAFFSIRLLVAS
TQAINLIGKQGSLIKSIQENSGASVRVLSGDEVPYYAVADERIVELQGEGLKVLKALEAV
IAHLRKFLVDHSVLPLFEKKTYNVPSSQEQHVETWADKPLAHGASQTGLAANYPLSATRE
SLFLDRENQLESQIPSARISLYGQDPSLPGIRSSGLGSSGLGSSSLSSSGLGSSGLGSSG
LGSSGLGSSGLGSSGLGSLGLGSSGLGSSGLGSSGLGSSSLGRTGAPIVTQIAQTMQIPL
AYAEDIIGIEGSNIAYIRRTSGAILTVQESMGLPDEITVEIKGTSTQVQLAQQLIQEVMS
NHKESLSSSYGRIDTTGLRSSYSQLSSSSYPPTSLPSQPYNGGYGSSNLGGYSTFRL
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaacgaacccgccgtgaacggcgtcgcaaaggcgccggaatcggtcttgcaa
tctcttgttcccaccaatacggtaaccgaaacgggggcgactactacctccgcctctgag
gccgaaacagcggtggcaccctctactgagtcccaactagagtccgcctcagctcccccg
tcagctaccattaccgccgctgacaagagatggcctggttggccgggagattgcgtgttc
aggctcattgttccggtggtcaaggtaggtagcatcattggtcgtaagggggagcttatc
aagaagatgtgcgaagagacgcgtgcacgaattcgagttcttgatggcgccgtaggcact
cctgatcgaatcgtgttgatatcgggaaaggaagagccagatattacactttcgccagca
atggatgctgttataagggtgtttaaacgtgtctcgggattatctgagagtgaggttgat
ggcaaagtgcctggagctgctggagctgcattcttttcaattcgattgttggttgcatcc
acacaagcgataaatttaattggaaaacaaggttcattgattaaatccatacaggagaat
tcgggtgcatctgtcagagtattgtcaggagatgaggtgccatactatgctgttgcagat
gaaagaattgttgagttgcagggtgaagggttgaaggttctcaaagctctggaagcagta
attgcacatctgaggaaatttttagttgatcatagtgttcttccactttttgagaagaaa
acttacaatgtgccatcctcacaagaacaacatgtagagacctgggcagacaagccatta
gctcacggtgcttctcaaactggacttgcagctaattatcctctatcagcaacgagggaa
tctttgtttcttgatcgtgaaaatcaattggaatcacagattccatcagctcgaatttct
ctatatggacaagatccgtcacttcctggaattcgttcttcaggccttggatcctcaggc
ctcggttcttcaagtcttagttcctcaggtctcggttcctcaggtctcggttcttcaggt
ctcggttcctcaggtctcggttcttcaggtctcggttcctcaggtctcggttccttaggt
ctcggttcctcaggtctcggttcttcaggactcggttcttcaggtctcggttcttcaagt
ctcggtcgtactggtgctcccattgttactcagattgcacaaactatgcaaattccactt
gcttatgcggaagacattattggcattgaaggatctaatattgcatacattcggcgtacc
agtggagccattctaactgtgcaagagagtatggggcttcctgatgaaatcactgtggaa
atcaaaggcacctcaacacaagttcagttggctcaacaactaattcaggaagttatgagc
aatcacaaagaatcactttcgagtagctatggtaggatagatactactggattgagatct
tcgtactctcaattgagcagctcttcctaccctccgacttcattaccgtcacagccctac
aatggtggatatgggtcttccaatcttggaggttacagtacattcaggctttga
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