Cannabis sativa (hemp): 115725232
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Entry
115725232 CDS
T08987
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B
KO
K03064
26S proteasome regulatory subunit T4
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
115725232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
csav03051
]
115725232
Proteasome [BR:
csav03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
115725232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_2
AAA_22
nSTAND3
PRS7_OB
DUF815
Prot_ATP_ID_OB_N
AAA_7
AAA_33
TIP49
Parvo_NS1
AAA_14
RNA_helicase
Mg_chelatase
AAA_18
Sigma54_activat
IstB_IS21
AAA_28
AAA_3
TsaE
AAA_lid_PRS2_C
AAA_25
NPHP3_N
AAA_24
NACHT
bpMoxR
ABC_tran
AAA_11
ATPase
NB-ARC
Sec8_N
ATPase_2
PhoH
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
115725232
NCBI-ProteinID:
XP_030510538
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Position
6:69866652..69870074
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AA seq
399 aa
AA seq
DB search
MSTESEDVVRRRTVTTEYRKKLLQHKELDSRVRAVREKLRTAKKEFCKTEDDLKSLQSVG
QIIGEVLRPLDNERLIVKASSGPRYVVGCRNKVDKEKLTAGTRVVLDMTTLTIMRALPRE
VDPVVYNMLHEDPGNVSYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYG
PPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDE
IDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGR
LDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA
IRAERDYVIHEDFMKAVRKLNEAKKLESSSHYNADFGKE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgaatcggaagacgttgtccgacgtcgcaccgtcaccacagagtaccggaag
aagcttctccaacataaggagctcgattcccgtgttcgcgcagtgagggaaaagttgcgg
actgccaagaaggagttttgtaaaactgaagatgaccttaagtcgcttcagagcgttggg
cagatcattggtgaagttcttaggcctcttgataatgaacgcttgattgtgaaggcaagt
agtggtcctaggtatgttgttggctgccggaataaagtggacaaggagaaactaactgca
ggaactcgagttgttctcgatatgactacattgactatcatgagggctcttccacgtgaa
gttgatccagttgtatacaatatgcttcatgaagatcctggtaatgttagctattctgct
gtgggaggacttggagatcagattagagagcttagggaatctatagagcttcctcttatg
aatcctgagctctttcttagagttggaatcaaacctccaaagggtgttcttctatatgga
cctcctggaacggggaaaactttgctggccagagctattgctagcaatatagatgctaac
tttttaaaggttgtatccagtgccatcattgataagtatattggtgaaagtgcaagattg
attagagaaatgtttggctatgctcgggatcaccagccttgtatcatttttatggatgag
atcgatgctattggtgggcgccgattcagtgaagggactagtgcagatcgtgaaattcaa
agaacactcatggagttgcttaatcaactagatggatttgaccagcttgggaaggttaaa
atgatcatggcaacaaacagacctgatgttctggaccctgcacttctccgtccggggaga
cttgaccggaaaatagagattccgttacctaatgaacagtcaagaatggaaattttgaaa
attcatgcttctggtattgccaaacatggagaaattgactatgaagcagttgtgaagctt
gctgagggattcaatggggctgatctccgaaatgtttgcactgaagctgggatgtctgca
attcgtgctgaaagggactatgtcatccatgaggatttcatgaaggctgtgcgaaaattg
aacgaagcaaagaaacttgaatccagctcccactacaatgctgatttcggaaaggaatga
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