KEGG   Cannabis sativa (hemp): 115725273
Entry
115725273         CDS       T08987                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115725273
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csav03041]
    115725273
Spliceosome [BR:csav03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    115725273
 Complex B
    115725273
 Complex C
   U2 SnRNP specific factors
    115725273
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd LLPH Desulfoferrod_N
Other DBs
NCBI-GeneID: 115725273
NCBI-ProteinID: XP_030510588
LinkDB
Position
6:18164309..18169751
AA seq 505 aa
MSSTLLEVTRSAHEEVERLERLIVKELQTDPSSNKDRLFQSHRVHHMIDTITVTTEKLVD
IYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDPNEDFEALL
KEEPLIEFSGEEAFGRYLDLHELYNQYINSKFGDHIDYSTYLNVFSQPHKIPRKLKLTRQ
YKEYIENLLEYLTYFFQRTEPLQDLDRIFSKLITEFEEQWENGLIEGWEGEGQGNGLVPD
WHAVIDLDYYNSVEELMVVGPEKLKEALAALGLKSGGTVQQRAERLFLTKDTPLEKLDKK
HFAKGSRGQEQNGVSAVNSFKEIALMEAKINKLCELLEETVDRTKDNIVKKQALTYEEIE
AEREEEDTQADTESDDDDQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEICGNYSY
WGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKRIQERQGVNKWRPDLE
EEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1518 nt   +upstreamnt  +downstreamnt
atgtcgtcgaccttattggaagtgactaggtcagctcatgaggaggtggagcggctcgag
cgcctcatagtgaaggaactccagaccgacccatccagcaacaaggaccgcttgtttcag
agccaccgtgtccaccatatgatcgacactatcaccgtcacaactgaaaaactggttgat
atatatgaagataaggataatgcaaggaaggatgaaattgcagctcttgggggccaaacc
gcaacgggaaccaatgtgtttagtgcattttatgatagattaaaagagattcgtgaatac
cacaggaggcatccagctgcacgcgttgttgatcctaatgaggactttgaagcgcttctg
aaggaggaaccattaattgaattcagtggggaggaagctttcggacgatatcttgatttg
cacgaattatataatcagtatatcaattccaaatttggagatcatattgattactctact
taccttaatgttttttcacaaccacataaaattcctcggaagctgaagttgacaaggcaa
tacaaggaatacatagaaaatctactggagtacctgacatattttttccagcgtacagag
cctctgcaagatcttgatagaatattctcaaagcttataacagaatttgaagagcaatgg
gaaaatggtctaatagaaggatgggagggtgaaggtcaaggaaatggacttgtaccggat
tggcatgctgtgattgatcttgattattataactcagttgaagagctgatggtagtgggt
cctgaaaagttaaaggaggcattggcggcattaggactaaagtcaggaggtacagttcaa
caacgtgctgagaggctttttctaacaaaagatacacctcttgaaaagttagataagaaa
cattttgctaaaggttcacgtggtcaagagcaaaatggggttagtgcagttaatagtttc
aaagaaattgctctgatggaggcgaaaataaataaactttgcgagttactggaagagaca
gttgatcgaacaaaagacaatattgtgaagaagcaggctctgacctatgaggaaattgaa
gcagaacgagaagaggaagatacacaggctgacactgaaagtgatgacgacgatcagcag
atttataatcctctcaaattgccaatgggttgggatggaaagcctataccttattggctg
tataaacttcatggccttggccaggagttcaagtgtgagatatgtggaaactacagttat
tggggccgtcgtgcctttgagcggcatttcaaggaatggcgtcatcaacatggaatgcgt
tgcctaggcataccaaacaccaagaatttcaatgaaatcacatctattgaggaagcgaaa
gaactatggaagaggatacaagaaagacaaggagtgaataagtggcgaccagatcttgaa
gaagagtatgaagacaaagagggtaacatctacaacaagaagacttacactgatcttcaa
cgtcagggactgatatga

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