Cannabis sativa (hemp): 115725355
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Entry
115725355 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115725355
KO
K13114
pinin
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03013
Nucleocytoplasmic transport
csav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115725355
03015 mRNA surveillance pathway
115725355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115725355
03041 Spliceosome [BR:
csav03041
]
115725355
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115725355
Spliceosome [BR:
csav03041
]
Complex C
Other components
EJC/TREX
115725355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
115725355
NCBI-ProteinID:
XP_060973338
LinkDB
All DBs
Position
6:complement(62652983..62658047)
Genome browser
AA seq
411 aa
AA seq
DB search
MATSFAEKSEDDLRKEIDELQRQQREITDRLRDPRGLRRGRLPTAAPRNFAANGARQRAF
TRPADRTELEDEPPAKRRLSSAVVKVEDGEIVEDAQANEDVNEDDSVMEATDGSLQQSGW
SRRDGNQRPMRKDFDIPSNEHVPRVLPKNEDPSLVSRNKRMLGQLLGTLEKFRKEDKQLS
GTEAFMRRSTSLQRAEQRAREESERLRQQERERIAEKRRRDLTLRARVSAKTEEKKLELL
YLRWSEHHKKLCNFIRTKTEPPIYYLPKKPLEADANEAEQRKEQAFEEWKASRREELTEY
QKEIGEQYLANVEKELERWQNARNRKANNDVLNLQETMDKELDTHRLEHGPKKRTIPSES
NNEEEDDVEDMNGEDDMMDDVLDVDDNTRRGEETIRTDAADNASPNADKIE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaacctctttcgcggagaaatcagaagacgatcttcgcaaggagatcgatgaactt
cagcgccagcaacgcgagattaccgaccgccttcgggatcctcgggggcttcgccgcgga
cgcttgcctaccgctgctcctcgtaactttgccgccaatggagctcgtcagcgagctttc
acccggcctgctgataggactgagctagaagacgaacctcctgcaaaaagacgactttca
tcagctgttgtgaaggtagaagatggagagatcgttgaggatgcccaagcaaatgaggat
gtgaatgaagatgattcggtcatggaagcaactgatgggagtttgcagcagagtggttgg
tctaggagagatggcaatcaaagaccaatgaggaaggattttgatatcccgagcaatgag
catgttccgagggtattgcctaagaatgaagatccaagcttggttagtaggaataaaaga
atgctggggcagcttctaggaactctggagaaattcaggaaagaagacaagcaactttca
ggaactgaggcatttatgcggagatcgacttccttacaaagagccgagcaaagagcacgt
gaagaaagtgaaagacttaggcagcaagagcgtgaaagaattgctgaaaagcgtaggaga
gatctgactctgcgggcacgtgtttctgccaagacagaagagaagaagttggaattgctg
tatcttcggtggagtgagcaccataaaaaactttgcaatttcataaggactaagactgag
cctccaatttattatttgccaaagaagccactggaggctgatgcaaatgaagctgagcag
cggaaagaacaggcatttgaagaatggaaggcttctaggagagaggaactgaccgaatac
cagaaagagattggggagcaatatcttgccaatgttgagaaagagttggagaggtggcaa
aatgcaaggaataggaaagcaaataatgatgtgctgaacttgcaggaaacaatggacaaa
gaattggacacccatagacttgagcatggtcccaagaaaagaacgattccgagcgaaagc
aacaacgaagaggaagatgacgtggaggacatgaatggggaggatgacatgatggatgat
gtgctagatgtggacgacaacactcgaaggggtgaagaaacaattaggacagatgctgcc
gataacgccagcccaaatgcagataaaattgagtag
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