Cannabis sativa (hemp): 115725432
Help
Entry
115725432 CDS
T08987
Name
(RefSeq) uncharacterized protein LOC115725432 isoform X3
KO
K14416
elongation factor 1 alpha-like protein
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115725432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csav03019
]
115725432
Messenger RNA biogenesis [BR:
csav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115725432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
Zn_ribbon_RanBP
MMR_HSR1
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
115725432
NCBI-ProteinID:
XP_030510804
LinkDB
All DBs
Position
6:2173909..2179057
Genome browser
AA seq
750 aa
AA seq
DB search
MPRKINTGVDYYDDYEDYDYDEYDYDGEEENVEVVQYTPESRRPETWSCSICTYDNEERM
NACDICGVLRNPLPKKADLFHAVEGICKHAEASLMAKSLFASLPHQKDGFETDNGNNVHK
LGKFQGHIHEFHKKFCTSNYHKINIAPFKFESPSPDDLVSIGLRSSKMGLKANVDNLKTS
ELSSAVIKDTTSRNEQQSSVRTTETVKIRGSANISDVSSDSLARDHLRSVGEASYKTSDT
AYAESVNSSSYSEPKGRQSNMDENINSSENKGKPESLASKVNNMALEVKTGKSNNVKSKK
TQSQIQYKPEKWMLPDQAKDTLIQLNLAIVGHVDSGKSTLSGRLLHLSGRISQKLMHKYE
KEAKQQGKGSFAYAWALDESAEERERGITMTVAVAYFDSKKYHVVVLDSPGHKDFVPNMI
SGATQADAAILVIDASLGAFEAGMDTMKGQTREHAQLIRSFGVEQIIVAVNKMDIIGYSN
DRFEFIKQQLGTFLRVCGFKDSSVFWIPLSVMENQNLVAAPSDARLSSWYRGPNLLDAID
AFQPPLRDFSKPLLMPICDVIKSASLGQVSACGKLEAGALRPGFKVLVMPSGEIGTVRSL
ERDSQACTIARAGDNVSVTLQGIDGSNVMAGGVLCHPDFPIFVAKHLEVKILVLDVTTPI
LVGSQLEFHIHHVKEVARVVKIVSLLDPKTGKVAKKAPRCLTAKQSAVVEVVLHGSVCVD
EFSSCRALGRVFLRALGRTVAVGIVTRIVE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaaaattaataccggagttgattattacgacgactatgaagattatgattat
gatgaatatgactatgatggagaagaagagaatgttgaagttgtgcagtatacgccagaa
agtagaaggcccgagacatggagttgctcaatatgcacgtatgataatgaagagaggatg
aacgcatgtgatatatgtggggttcttcgcaaccctttgcccaaaaaagcagatctcttt
catgcagttgaaggcatatgcaaacatgctgaagcatccctaatggccaagtctcttttt
gcatcactgccgcatcagaaagatggttttgagactgacaatggcaataacgtccacaag
cttgggaaattccaagggcatatacatgaattccataagaaattttgtactagtaactat
cacaagattaatatagctcctttcaagtttgaaagtccatctcctgatgatttggtttca
attggattgcgttcatccaaaatgggtttgaaagccaatgttgataatttaaagacatca
gaactttcttcagctgtcattaaggatacaacatctcgtaatgaacaacaatcaagtgtt
cgaacaacagagacagttaaaataagaggaagtgctaacatttcggatgtctcatctgat
tctcttgcaagagatcacctcagatctgtgggggaggcgagttacaaaacaagtgatact
gcttatgcagaatcggttaatagttcatcttattcagaaccaaaaggcagacagagtaac
atggatgagaacattaattcttcagagaataagggcaagccagaaagtcttgccagtaaa
gttaataacatggctttggaggttaagactggaaagtcaaacaatgttaaatctaaaaag
actcagtcacagatacaatataaacctgaaaagtggatgcttcctgatcaagctaaagac
accctgattcagttgaatcttgctattgttggtcatgttgattctgggaaatcaactctc
tctggaagattgctgcacctttcaggtcggatttctcaaaaactaatgcacaaatatgaa
aaagaggccaaacagcagggaaaagggtcctttgcttatgcttgggcattggatgaaagt
gctgaagaaagggagaggggaatcactatgacggtggctgtggcatatttcgattcgaag
aagtatcacgttgttgtgcttgactctcccgggcacaaagattttgttcccaacatgatc
tctggagcaacacaagctgatgcggcgattctcgtaatagatgcctcccttggggcattt
gaagcaggcatggacaccatgaaggggcaaacacgagagcatgcgcaactcatcagaagc
ttcggtgtggagcaaattatcgttgctgtgaacaagatggatatcataggatactcaaat
gatcggtttgagttcattaagcaacaacttgggacatttctccgcgtttgtggttttaaa
gattcttctgtattttggattccattgagcgttatggaaaatcaaaatctggttgcagct
ccgtctgatgcacgcctctcttcctggtatcgaggacctaacttgctggatgcaattgat
gctttccaacctcccttaagagatttctcaaaacctctgctcatgcctatatgcgatgtc
atcaagtcggcttcacttgggcaggtttctgcctgtggtaaattggaagctggagctctt
cgtcccggctttaaggttctggttatgccttctggagagataggaaccgtgcgatcctta
gagcgtgactctcaggcttgcaccattgcaagagctggagataatgtttcagttaccctt
caaggcatcgacgggagcaatgtgatggctggtggggtgctatgtcaccccgattttccc
atttttgtcgctaaacatttagaagtgaagattctcgtcttggatgtgacaactccaata
ttagttggttctcagttggagtttcacatacaccacgtaaaggaagtggcgagagtcgta
aagatagtatcattgctcgatccaaagacgggcaaggtagcaaagaaggctcctcgttgt
cttactgccaaacagagcgctgttgttgaggttgttttgcacggatcagtttgcgttgac
gagttctcgagttgtagagctcttggaagggtgtttctgagagcattaggacgaactgta
gcggtcggcattgtaacaagaattgttgagtag
DBGET
integrated database retrieval system
