Cannabis sativa (hemp): 115725435
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Entry
115725435 CDS
T08987
Name
(RefSeq) nuclear matrix constituent protein 1 isoform X1
KO
K27866
protein CROWDED NUCLEI
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csav03036
]
115725435
Chromosome and associated proteins [BR:
csav03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
115725435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115725435
NCBI-ProteinID:
XP_030510809
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Position
6:complement(11709580..11716330)
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AA seq
1188 aa
AA seq
DB search
MFTPQRKAAEAALSLGPRLSADKGKAVAFLDGPPPPLGSLSETRVNMMLESDMGNLDDWR
RFKEVGLLDEAVMVRKDHEALAEKVTKLESQLFDYQYNMGLLLIEKEDWASKFEELRQDL
AETHEMLKREQSAHLIALSEAEKREENVRKALGAEKQCVFELEKALYEMHDEQAEIKLTS
ASKLAEADALANGMEEKFLEIEKKLQAADARLAEVNRKSTELKVRLEEVEARESVLHKEQ
QTLSAERETHKATFSKHQDDLQEWERRLQEREERLCKDRKILKEREEKANENERIHKRME
IELEELEKKIESCNLDIIQKEEDITKRLADLSSKEKEADSLRNVLEMKSKELHQLEEKLS
LREKIEVQQLLDEHKAILDVKMKELDVEIEDRRKSLDRELSSKADALGMKEAEINHREEK
LEKREHAFQEKSGRLKEKNKESEEKLKSIKEREKIMKAEEKKLEMEKQQMLADKESVQSL
LAEVDKIKAENIQLELQICKERESLIVTDEERSQHVHLQLELKQEIENYRLQNELLLKEA
NDLKQEKENFEKEWEDLDEKRSKISKELRELHEEKENLTKLRHLEEERLNEEKRAIQEFK
QREMENLKLENDRFAAKMTAEQLAISEKAQFEQRQMAQDFELQRRNLETDLRKEQEEMEK
LLHERERAFRDETERELNNIKKLKEVAQKEMEEVRLERQRTKKQREELVLNKEQLKVNQL
EIQNDIDQLGILSNKIKYQREELIKDRNQFLSFVDKLKNCKDGGDIGREFSLSDFHVPEV
NHGDAVPLPNFDDELVEKSSDGLDLDLGSSMSGASMSWLKKCTSKIFKVSPSKKSENVVA
PVSVELPPTAQEVNEPKVLDNDGGRGPGIPEDRQPYPSKISNFGVHTQKVQFGNVIEIDD
GYAPDHSQLDSKVDEVPEDSLQSEVKSGLQKSGRRRKSALRRTRSVKAVVEEAKAFLGES
LDEPGSNVVMQPSDSYNTNEESRGDSGHAMKGYSYPTRKRLRDQASNISESEQDAGDSEA
CSGSVSTTGRRGRKKQQSVASGLETPGNRYNFRRRKNVDSTNVDPKMTEEKEAVGSGMVD
VAANPEVVSISSDVATKSTQTKQVVQVITTKTVEFAEEKVVRFKTTADADIDAEQARLGE
STEIGNEVNETLKHGGEDESNDDYDEDEEELHPGEVSMGKKLWSFFTT
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgccacagcggaaagcagcggaggcagcactgtctctcgggccaaggctcagc
gctgataagggcaaagcagtggcgtttctagatggtccgccaccaccattgggttcattg
agcgagacccgggttaatatgatgttggagtcagacatggggaatttggatgattggaga
aggtttaaggaagtgggtttgttggacgaggcagttatggtgaggaaagaccacgaagca
cttgctgagaaagtcaccaagcttgaatcccagctctttgattatcagtataacatgggg
ctcctcctgattgagaaggaggactgggcttcaaagtttgaagaactaaggcaagattta
gcagaaacacatgagatgctgaagcgtgaacaatcagctcatttaatagcattatctgaa
gctgagaagcgagaagaaaatgtgaggaaagcactgggtgctgagaaacagtgtgttttt
gagcttgaaaaggctttgtatgaaatgcatgatgagcaggctgaaatcaagcttacatct
gcttcgaagttggcagaagcagatgcattggcaaatggaatggaagagaagtttttggag
atagaaaagaagttgcaagctgcagatgctaggcttgctgaggtgaacaggaagagtaca
gagttgaaggtaaggttagaagaggtggaggctcgggaaagtgtgcttcacaaggagcag
cagactttaagtgcagagcgggaaacacacaaggcaacttttagtaaacatcaggatgat
ttgcaagagtgggagaggagactacaagaaagggaagagaggctctgcaaagatcggaag
atcctcaaggagagagaggaaaaggcaaatgaaaatgagagaatacataaacggatggag
attgaacttgaagaattagaaaagaaaattgagtcgtgtaacttggatataatacagaaa
gaagaagatataacgaaacggctagctgatttgtcatctaaagagaaagaagctgattct
ttgagaaacgttttagagatgaaaagcaaagaattgcatcaactagaagaaaagctaagt
ttacgagaaaaaattgaggtacaacagttacttgatgaacacaaagctattcttgatgtg
aaaatgaaggagcttgacgtggaaatagaagatagacgaaagtctcttgacagagagcta
tcttccaaggcagatgcattaggaatgaaggaagctgaaataaaccacagggaagaaaag
ctagaaaagagagagcatgcatttcaggagaagtctggcaggcttaaggagaaaaacaag
gaatcagaagagaaattgaaatctataaaggagagggaaaagataatgaaagctgaggag
aaaaagctggagatggagaagcagcaaatgcttgcagataaagagagtgtacagagtctc
ttagccgaagttgataagataaaggctgaaaatatccagcttgagctgcaaatttgtaaa
gagagggagagcctgatagtaactgacgaagagaggtcgcaacatgtccatttgcagtta
gaattgaaacaagaaattgaaaattatagacttcagaatgagttgcttttaaaggaagct
aatgatctaaaacaagagaaggagaatttcgagaaagaatgggaagatttggatgagaaa
agatctaaaattagcaaagagctcagggaactacatgaggagaaggaaaatctgacaaaa
ttgcgacacctggaggaggagagattgaatgaagagaaacgcgcaattcaggaatttaaa
cagcgggagatggaaaaccttaaactggaaaacgatcggtttgcagcaaaaatgacggct
gagcaattagcaatatctgagaaagctcaatttgagcagagacaaatggctcaagatttt
gagttgcagagaaggaatcttgagactgacttgcgaaaggagcaggaagaaatggagaag
ctccttcatgaaagggagagagcatttagggatgaaacagaaagggagcttaacaacatt
aagaaactgaaagaagttgctcagaaagaaatggaagaagtaaggttggaaagacagaga
accaaaaagcaaagagaggagctagtgttgaacaaggagcaattgaaagtgaaccaactt
gaaatacaaaatgatatagatcagcttggtattcttagcaataagatcaagtatcagcga
gaagagctgatcaaagacaggaatcagtttctctcttttgttgacaagctcaagaattgc
aaggatggtggagatataggaagggaattttcactttctgatttccatgtacctgaagtg
aatcatggggacgctgttcctcttccgaactttgatgatgaacttgtggagaagtcatca
gatggtttagatttagatttgggatcttctatgtcaggggcaagcatgtcttggcttaaa
aaatgcacatcaaagatttttaaggtttcaccaagtaaaaaatccgaaaatgttgttgct
ccagtatctgtggaattaccaccaaccgcccaagaagtaaatgagcctaaagttctcgac
aatgatggaggaagagggcctggtattcctgaagataggcagccttacccttctaaaatt
tctaactttggtgttcatactcaaaaggttcaatttggcaatgtcatagagattgatgat
gggtatgctccagatcatagccaattggacagtaaggtggatgaagttccagaagattct
ttgcaatcagaagtgaagagtggtcttcaaaaatctggtaggagacgcaaatctgcattg
cgtagaacgcgatcagtgaaggcagttgttgaagaagcaaaagcttttcttggtgagtct
ctagatgaacctggatcaaatgtagtaatgcagcctagtgattcttacaatacaaatgaa
gaaagtcgtggtgattcgggtcatgctatgaaaggatatagttaccctactaggaagcgt
ctgcgtgatcaggcatctaatatttcagaaagtgaacaagatgcgggtgatagtgaagca
tgttccggtagtgtaagtactactggtcgtcggggcaggaagaagcagcaatctgttgct
tctggtttagagactcctggaaatcgatacaatttcagacggcgcaagaatgtggactca
accaatgttgacccgaaaatgacagaagagaaagaagctgtaggcagtggtatggtagat
gtagcagcgaatccagaagttgtctccatatcgtcggacgtagccacgaagagcacccaa
accaaacaagttgtgcaggtgatcacaacgaaaactgtggaatttgctgaagagaaagtt
gttcggtttaaaactacagcagatgctgatatagatgctgagcaagcaagattgggtgaa
agtacagagattggcaatgaagtaaatgaaactttaaaacacggcggtgaagatgagagc
aatgatgattacgatgaagacgaggaggagctgcatcctggtgaagtttcaatggggaaa
aagttatggagtttcttcacaacatga
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