Cannabis sativa (hemp): 115725622
Help
Entry
115725622 CDS
T08987
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
csav
Cannabis sativa (hemp)
Pathway
csav00730
Thiamine metabolism
csav00900
Terpenoid backbone biosynthesis
csav01100
Metabolic pathways
csav01110
Biosynthesis of secondary metabolites
Module
csav_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
115725622
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
115725622
Enzymes [BR:
csav01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
115725622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_N
TPP_enzyme_C
E1_dh
Motif
Other DBs
NCBI-GeneID:
115725622
NCBI-ProteinID:
XP_030511064
LinkDB
All DBs
Position
6:4713863..4721629
Genome browser
AA seq
725 aa
AA seq
DB search
MSSLLRTSFIPITSFLSTTNYQKMNNGVMMISASLDRNLSEDIGDHHQKITLLQDTQNSK
VLNFSGEKPSTPILDTINYPIHMKNLSIEKLGILADELREEIVYSVSKTGGHLSSSLGVV
ELTIALHHVFNTPKDKIIWDVGHQAYGHKILTGRRSRMKTIRQSFGLAGFPKRDESEHDA
FGVGHSSTSISAALGMAIARDLVGKENHHVIAVIGDGGMSGGQAYEAMNNAGYLDTNLII
ILNDNKQLSLPTATLHAPASPVGALTKALAKLNSTTKFRQLREAAKDISKQIGGQAHEIA
SKVDTCVRGMVAGAAGTSLFEELGLYYIGPVDGHNVEDLVNILNNVKAMQTSGPVLIHVI
TEKGKGYAPAELAHDKMHGVVKFEPNSGKQLKSKSSTRSYTQCFAESLIAEAERDDRVVA
IHAAMGGGTGLNLFQDRFPDRCFDVGIAEQHAVTFAAGLAAEGMKPFCTIYSSFLQRGYD
QVVHDVDLQKLPVRFAMDRGGLVGADGPTHCGAFDITFMACLPNMVVMAPSCETELMNMV
ATAAAIDDRPSCFRYPRGNGIGSVLPPNNKGIPLQIGKGRVLREGSRVAILGYGTIVQSC
VAAAELLLQTLNISITVADARFCKPLDGNLIKQLAQEHEILITVEEGSIGGFSSHVSHYL
SLNGLLDGKLKWRSMMLPDRYIDHGSQSNQMEAAGLTSKHIAATALSLIDEPNKLHLPNL
HVNFR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagttctttgctaagaactagtttcatcccaataactagttttctctctactacaaat
taccaaaagatgaataatggggtgatgatgatttctgcttctctagacagaaacttatca
gaggatattggtgatcatcatcagaaaataaccttattacaagatacccaaaatagtaag
gttcttaatttttctggagaaaagccttctactccaattcttgacactataaactaccca
attcatatgaaaaatctttccattgagaagcttgggattttagctgatgaattaagagag
gaaatagtatacagtgtgtccaaaacaggagggcatttgagttcaagcttgggtgtggtt
gagctcacaatagcacttcaccatgttttcaacactcccaaagataaaattatttgggat
gttggccaccaggcatacggtcacaaaatattaacaggaagacgatcaagaatgaaaaca
attcgacaaagttttggacttgcagggttcccaaaaagggatgagagtgagcatgatgca
tttggagttggacatagctccactagtatttctgcagctcttggtatggcaatagcaaga
gacttagtagggaaagagaatcatcatgtgattgcagtgattggagatggtgggatgagt
ggtggacaagcctatgaagcaatgaacaatgcaggttaccttgataccaatctcatcata
atcttaaatgacaacaaacaactctctcttccaactgccactctccatgcccctgcttct
cctgttggtgccctaaccaaagccctagctaagcttaactccactacaaagtttcgccag
ttacgagaagctgctaaggacatttccaagcaaataggagggcaagctcatgaaattgca
tcaaaagttgacacttgtgttagaggcatggtggctggtgcagcagggacttcactattt
gaagagcttggactgtattacattgggccagtagatggtcataatgtggaagatctagtc
aacattttgaataatgtcaaagctatgcaaacatcaggacctgttctcatccatgttatt
actgagaaaggaaaaggctatgctcctgctgaactagcacatgataaaatgcatggtgtt
gtgaaattcgaaccgaattcggggaagcagttgaagtcgaaatcgagtactcgttcttac
actcagtgttttgctgagtctttgattgcagaagctgagagagatgacagagttgtggct
attcatgctgctatgggaggtggtactggactcaacttattccaagatcgtttcccggat
agatgtttcgatgttgggatagccgagcaacatgctgttacctttgctgctggcttggct
gctgaaggcatgaagcccttttgtactatttactcttcttttctacaaagaggttatgat
caggtggttcatgatgtagaccttcaaaaactcccagtgagatttgcaatggacagaggt
ggtttagtgggtgcagatggtccaactcattgtggtgcctttgacataactttcatggct
tgtttaccaaacatggtggtcatggctccttcttgtgagactgagcttatgaacatggtg
gccacagctgcagccatcgatgaccgacctagctgctttaggtacccgagaggaaatggc
attggatcagtgcttccaccaaacaacaaaggaattccattacagattggcaaaggaagg
gtgttaagagaaggaagcagggtagccattttaggctatggaacaatagttcaaagttgt
gtagcagcagccgagcttcttcttcaaacgcttaatatctcgatcaccgttgctgatgca
agattttgtaagcctcttgatggaaatttgatcaagcaactagctcaagaacatgagata
ttgatcactgtagaagaaggctccattggagggtttagctctcatgtttcccactacttg
agcctcaatggattactagatggcaagcttaagtggaggtctatgatgcttcctgataga
tacattgaccatggatcacaatcaaaccaaatggaagctgcagggctcacttctaaacac
attgcagctactgctttatcactcatagatgaacccaacaagcttcatcttcctaatctc
catgtgaatttccggtag
DBGET
integrated database retrieval system
