Cannabis sativa (hemp): 115725709
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Entry
115725709 CDS
T08987
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
csav
Cannabis sativa (hemp)
Pathway
csav03440
Homologous recombination
csav03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115725709
03450 Non-homologous end-joining
115725709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csav03032
]
115725709
03400 DNA repair and recombination proteins [BR:
csav03400
]
115725709
DNA replication proteins [BR:
csav03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
115725709
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
115725709
BRCA1-C complex
115725709
NHEJ (non-homologous end-joining)
MRX complex
115725709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
MCM2_N
Motif
Other DBs
NCBI-GeneID:
115725709
NCBI-ProteinID:
XP_030511163
LinkDB
All DBs
Position
6:complement(21783448..21792927)
Genome browser
AA seq
727 aa
AA seq
DB search
MADLSREDISNTLRVLVATDCHLGYMEKDEVRRHDSFQAFEEICSIAVQKEVDCVLLGGD
LFHENKPSRTTLVKAIEILRRHCLNDRPIQFQVVSDQTVNFPSTFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLNPILIKKGSTAVA
LYGLGNIRDERLNRMFQTPHAVQWMRPESQEGCQVSDWFNILVLHQNRVKTNPKNAINEH
FLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGN
QYRPTKIPLTSVRPFEYTEVVLKEESDIDPNDQNSILEHLDSVVRNLIEKSRKKAANGSE
FILPLIRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASKKGQAGAKIGDSERLR
PEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVNKDDKMAFYSCLLYNLEETRNKIA
RDSDILKFEEEDLILKVGECMEERVKERSTRPKDSALFTSDLQSSEDLRSKSGAGAGSTV
SFSDDEDATQLSGIKSTARGRRGSSSLSGVASELDKGKTSTRGRGRGRGRGRASSNMKQT
TLDSTLGFRQSLRSASAAATAAVQNIAVDETNVDSSSSEDAGKFDVDEIDDSSENEGVQG
KGRKRAAPRGRGRGSSQSSKRGKKSENSALHRMLMSKDDDDDDEDNVAKRFNKSQPRVTR
NYGALRR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttatcgagagaggatattagcaatacacttcgagtacttgttgctacggat
tgccatttgggctatatggagaaggatgaagtacggcgtcacgattcattccaggcattt
gaagagatatgctcaatagcggtacaaaaggaggtggattgtgtacttctaggtggtgat
cttttccatgagaataagccttcaaggacaacactagttaaggccattgagattcttcgt
cgtcactgcctcaatgatcggcctatacagttccaagttgttagtgaccaaaccgtgaat
tttccaagcacgtttggtcatgtaaactatgaagatccacacttcaatgttggattgcct
gtattcagtattcatggaaaccatgatgatcctgctggagtggataacctttccgcagtt
gatattctctcagcatgcaatcttgtgaactattttgggaaaatggtccttgggggttct
ggtgttggtcagatcacccttaatcctattcttattaagaagggatcgacagcagtagct
ttgtatggtcttgggaatattcgagatgaaaggcttaatagaatgtttcagactccacat
gctgtacaatggatgaggcctgaatctcaagagggttgtcaagtgtcagactggtttaac
attcttgtgcttcatcagaacagagtaaagacaaaccctaaaaatgcaatcaatgaacac
tttttgccacgcttcctagacttcattgtttggggccatgaacatgaatgtcttgtcgac
cctcaggaggttccagggatgggatttcacattacccaacctggttcgtcagttgccaca
tcactgattgatggagaatcaaagccaaaacatgtgcttctgctagagattaaggggaat
caatatcgtccaaccaagatacccttgacatcagtgagaccgttcgagtatacagaggtt
gtattaaaggaagaatctgatattgatcccaatgatcaaaattctattcttgaacacttg
gattcagtggttagaaatctcatagaaaaatccaggaaaaaggctgctaatggctcggag
tttatacttccactaatcagaataaaggtagactactctggatttatgacaataaatcct
caaagatttggtcagaagtacgtaggaaaggttgcaaatcctcaagacatccttatattt
tcaaaggcttcaaaaaagggtcaagctggtgctaaaattggtgattctgaacgacttcgc
ccagaagagcttaatcaacaaaacatagaggctttagttgctgaaaataatctgaaaatg
gagattcttcctgttaacgacttggatgttgcattacacaattttgttaataaggatgac
aaaatggctttctactcttgtctgctgtacaatcttgaggaaacacgaaataaaattgcc
agggattctgatatcctgaaatttgaagaggaagatttaattcttaaagttggcgaatgc
atggaggagcgtgtgaaggagaggtctacacggcctaaggatagtgcactgttcacctca
gatttacaatcctctgaggatttgagaagtaaaagtggagcaggagctggaagcactgtt
tcctttagtgatgatgaagatgcaacacagttatctggtataaagagtacagcaagaggc
cggagggggtcttctagcctatctggtgttgcttctgagcttgataaagggaaaacctcc
acaagaggacggggtaggggtaggggaaggggtagggcatcaagtaacatgaagcagaca
actcttgattcaactcttggatttcgccaatctctgagatctgcctcagctgctgcaacc
gctgcagttcaaaatattgctgttgacgagactaatgtagattcttcttcaagtgaggat
gctgggaaattcgatgttgatgagattgatgacagttcggaaaatgaaggtgtccaagga
aaaggacgcaaaagggctgctccaagaggaagaggtagaggttcttcacaatcctctaag
cggggaaagaaatcagaaaactctgcattgcatcgaatgcttatgagcaaggatgatgac
gatgatgatgaggataacgttgcgaagagatttaacaaatctcaacctcgggtaacaaga
aattatggtgctctaagacggtaa
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