Cannabis sativa (hemp): 133029020
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Entry
133029020 CDS
T08987
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csav03000
]
133029020
Transcription factors [BR:
csav03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
133029020
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
133029020
NCBI-ProteinID:
XP_060966180
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Position
2:16693277..16695893
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AA seq
395 aa
AA seq
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MWSGPSSRSINYGLPPEMGMVGLRDVFVVAPASSFHHNNHHPHHHLHHNLNHDPNLISDH
SLNGSNPATALGVGVGVGVIPLLTAAPCLGPSHLDEATEANALGSSSAAARSRNGGIQLW
QSQAQQAAAVSAAQTQLHPHFFKKPSIHDHGNSEIGGNLVIQSGGGGGINVGSGSTSSST
ATCQDCGNQAKKDCTHRRCRTCCKSRGFDCSTHVKSTWVPAARRRERQLMTSAGPGGGTG
PGSSGSTSGAKKPRLIASQTTSHTSTSNTTPPRSFDTSSSHQDASFKETLPGQVRAPAVF
KCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVETTTRDNSTFPNLSELHLGGGGG
RNGASSSSPMLDPSDVYAASTSGLLGGSTYGNPIN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtggtccggtccatcttcaaggtccatcaactacggtcttccacccgagatgggcatg
gtgggtcttcgagacgtcttcgtcgtcgcaccagcctcttctttccaccacaacaaccac
catccccaccaccatctccaccacaacctcaaccacgacccaaacctcatctccgaccac
tctctcaacggctccaaccctgccacagccctcggcgtcggcgttggtgttggcgtaatc
ccattactaacagcagctccttgtctcggtccatcacatctcgatgaagctaccgaggcc
aatgcactaggctcttcctcagctgcggctcgaagccgaaatggcgggattcagctgtgg
caaagtcaggctcaacaggcggctgctgtctcggcagctcaaactcaactccatccgcat
ttctttaagaagccctcgattcacgaccacggaaacagcgaaatcgggggtaatttggta
attcagagcggtggaggaggcggaattaatgttgggtctggatcgacgtcgtcctccaca
gcaacgtgtcaagattgtggaaaccaggccaaaaaagactgtacccatagaaggtgtaga
acttgttgcaagagtcgaggtttcgactgctccacgcacgtgaagagcacatgggtcccg
gccgctcggaggagagagcgtcagctcatgacttcggccggtcctggtggcggaaccgga
cctgggtcttccgggtcgacttcgggtgcaaagaaacctagactcattgcctcccaaacc
acttctcacacttctacttccaacactactccccctagaagcttcgataccagctctagt
caccaagacgcgagcttcaaagaaacgttaccgggtcaagtacgtgcaccggcggttttc
aagtgcgtacgagtaacggctgtggaggatggagaagacgagtatgcttatcaagcggtt
gttaagatcggtggtcatgttttcaaaggctttttatacgatcaaggtgtcgaaacaaca
acccgcgataatagtacttttccaaatctttcagaattgcatttgggtggcggaggagga
agaaatggggcgtcttcttcgtcgccaatgctcgatccctccgatgtctacgcagcctcc
acatcaggtttgctcggaggttccacctatggtaatccaataaattaa
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